RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
HMGCLL1-209ENST00000515546 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
HMGCLL1-209ENST00000515546 H0YIZ8 118 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 H3BP45 60 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 K7EPK0 472 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 FABP1P07148 127 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 ATF4P18848 351 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 AP2S1P53680 142 aaPredicted RBP10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 Q5BKY6 102 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 PPP1R1CQ8WVI7 109 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 ST6GAL2Q96JF0 529 aa10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 SEPSECSQ9HD40 501 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 STRAPQ9Y3F4 350 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
HMGCLL1-209ENST00000515546 LCE6AA0A183 80 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 SSSCA1O60232 199 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 S100A10P60903 97 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 CD300CQ08708 224 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 LRRC37A5PQ49AS3 106 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 SPANXN5Q5MJ07 72 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 SIGLEC15Q6ZMC9 328 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 ACOT7LQ6ZUV0 252 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 GATAD1Q8WUU5 269 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 NRN1Q9NPD7 142 aa10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 PAIP2BQ9ULR5 123 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 LSM5Q9Y4Y9 91 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-209ENST00000515546 A0A0J9YWU9 116 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 SMLR1H3BR10 107 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 PAX9P55771 341 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 RAP2BP61225 183 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 CYCSP99999 105 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 EWSR1Q01844 656 aaKnown RBP eCLIP10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 SMIM8Q96KF7 97 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 PBDC1Q9BVG4 233 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 OR5AC2Q9NZP5 309 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 PFDN2Q9UHV9 154 aa10.86□□□□□ -0.67
HMGCLL1-209ENST00000515546 PMS2P5A8MQ11 134 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 MPC2O95563 127 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 CFDP00746 253 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 LYZP61626 148 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 OR2F1Q13607 317 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 ASB13Q8WXK3 278 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 SLC45A2Q9UMX9 530 aa10.85□□□□□ -0.67
HMGCLL1-209ENST00000515546 DEDDO75618 318 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 CCNKO75909 580 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 TAS2R30P59541 319 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 TMEM144Q7Z5S9 345 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 AKAP14Q86UN6 197 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 STHQ8IWL8 128 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 OR2T35Q8NGX2 323 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 RAB40CQ96S21 281 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 MBD2Q9UBB5 411 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 FBXL17Q9UF56 701 aa10.84□□□□□ -0.67
HMGCLL1-209ENST00000515546 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 SOCS3O14543 225 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 TSC22D2O75157 780 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 SPP1P10451 314 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 C4BPBP20851 252 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 SNRPD3P62318 126 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 AKR1C1Q04828 323 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 ACTL10Q5JWF8 245 aa10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 MORN3Q6PF18 240 aaPredicted RBP10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.68
HMGCLL1-209ENST00000515546 FNDC10F2Z333 226 aa10.82□□□□□ -0.68
HMGCLL1-209ENST00000515546 DLK1P80370 383 aa10.82□□□□□ -0.68
HMGCLL1-209ENST00000515546 TMEM182Q6ZP80 229 aaPredicted RBP10.82□□□□□ -0.68
HMGCLL1-209ENST00000515546 TCTE3Q8IZS6 198 aa10.82□□□□□ -0.68
HMGCLL1-209ENST00000515546 TMEM217Q8N7C4 229 aa10.82□□□□□ -0.68
HMGCLL1-209ENST00000515546 BPIFCQ8NFQ6 507 aa10.82□□□□□ -0.68
HMGCLL1-209ENST00000515546 METTL15P1P0C7V9 234 aa10.81□□□□□ -0.68
HMGCLL1-209ENST00000515546 OR11H4Q8NGC9 324 aa10.81□□□□□ -0.68
HMGCLL1-209ENST00000515546 OR11H2Q8NH07 326 aa10.81□□□□□ -0.68
HMGCLL1-209ENST00000515546 RARRES2Q99969 163 aa10.81□□□□□ -0.68
HMGCLL1-209ENST00000515546 IGSF23A1L1A6 192 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 FAM24AA6NFZ4 105 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 E5RGE8 158 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 L7N2F9 121 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 PET100P0DJ07 73 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 GATA2P23769 480 aaPredicted RBP10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 PSMB3P49720 205 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 VAMP2P63027 116 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 SAMD13Q5VXD3 122 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 CYP2G1PQ6ZSU1 146 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 C17orf77Q96MU5 243 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 SLC25A32Q9H2D1 315 aa10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 LYRM2Q9NU23 88 aaPredicted RBP10.8□□□□□ -0.68
HMGCLL1-209ENST00000515546 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
HMGCLL1-209ENST00000515546 H3BMM0 161 aa10.79□□□□□ -0.68
HMGCLL1-209ENST00000515546 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
HMGCLL1-209ENST00000515546 PVALBP20472 110 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms