RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C4orf46Q504U0 113 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 SPATA31B1PQ5VZV4 182 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 CSNK1G2-AS1Q8NCQ2 148 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 C7orf50Q9BRJ6 194 aaKnown RBP9.91□□□□□ -0.82
TCOF1-215ENST00000515516 TMEM147Q9BVK8 224 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 PSENENQ9NZ42 101 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 SLC45A2Q9UMX9 530 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 X6R8D5 127 aa9.91□□□□□ -0.82
TCOF1-215ENST00000515516 PLECQ15149 4684 aaKnown RBP9.9□□□□□ -0.82
TCOF1-215ENST00000515516 SMCO3A2RU48 225 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 IGKV3-20P01619 116 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 ORM2P19652 201 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 HLA-DMBP28068 263 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 MEOX2P50222 304 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 POLR2GP62487 172 aaKnown RBP eCLIP9.9□□□□□ -0.82
TCOF1-215ENST00000515516 ID3Q02535 119 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 CNPY1Q3B7I2 92 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 FOXI2Q6ZQN5 318 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 OR4B1Q8NGF8 309 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 C16orf92Q96LL3 132 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 WDR12Q9GZL7 423 aaKnown RBP9.9□□□□□ -0.82
TCOF1-215ENST00000515516 SAV1Q9H4B6 383 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-215ENST00000515516 SLC25A22Q9H936 323 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 FLVCR2Q9UPI3 526 aa9.9□□□□□ -0.82
TCOF1-215ENST00000515516 IGKV1OR2-108A0A075B7D4 117 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 ISLRO14498 428 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 SSSCA1O60232 199 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 ACOT7LQ6ZUV0 252 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 OR1B1Q8NGR6 318 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 GPR82Q96P67 336 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 RPRMQ9NS64 109 aa9.89□□□□□ -0.83
TCOF1-215ENST00000515516 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-215ENST00000515516 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 PRSS46E5RG02 174 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 SCGB1D2O95969 90 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 IL5P05113 134 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 ANXA7P20073 488 aaKnown RBP9.88□□□□□ -0.83
TCOF1-215ENST00000515516 TMEM144Q7Z5S9 345 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 S100A7AQ86SG5 101 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 OR4D5Q8NGN0 318 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 SMIM8Q96KF7 97 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 RSG1Q9BU20 258 aa9.88□□□□□ -0.83
TCOF1-215ENST00000515516 HYDINQ4G0P3 5121 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 IGHV3OR16-12A0A075B7B8 117 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 TMEM189A5PLL7 270 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 SOCS3O14543 225 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 IL7P13232 177 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 GATA2P23769 480 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-215ENST00000515516 FXYD7P58549 80 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 RAP2BP61225 183 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 PSG9Q00887 426 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 IAH1Q2TAA2 248 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-215ENST00000515516 GDF5OSQ5U4N7 250 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 CYP2G1PQ6ZSU1 146 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 Q6ZTC4 211 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 RPP25LQ8N5L8 163 aaKnown RBP9.87□□□□□ -0.83
TCOF1-215ENST00000515516 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 SLC25A32Q9H2D1 315 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 NDUFA13Q9P0J0 144 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 GSKIPQ9P0R6 139 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 MGAT4CQ9UBM8 478 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 GOLT1BQ9Y3E0 138 aa9.87□□□□□ -0.83
TCOF1-215ENST00000515516 HYPMO75409 117 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 DEDDO75618 318 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 DEFB1P60022 68 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 RRAS2P62070 204 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-215ENST00000515516 SELENOTP62341 195 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 OR10P1Q8NGE3 313 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 NEU1Q99519 415 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 SDHCQ99643 169 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-215ENST00000515516 HIGD1AQ9Y241 93 aa9.86□□□□□ -0.83
TCOF1-215ENST00000515516 OR5G3P0C626 314 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 SPART-AS1P0CW21 52 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 EMP1P54849 157 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 TAS2R30P59541 319 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 DLK1P80370 383 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 FGL1Q08830 312 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 ZNF846Q147U1 533 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 FAM78BQ5VT40 261 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-215ENST00000515516 TMEM182Q6ZP80 229 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-215ENST00000515516 MITD1Q8WV92 249 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 NPVFQ9HCQ7 196 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 DOK5Q9P104 306 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 RNF24Q9Y225 148 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 RFNGQ9Y644 331 aa9.85□□□□□ -0.83
TCOF1-215ENST00000515516 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 DEFB131BA0A096LNP1 70 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 A0A0J9YX75 114 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 F6UB75 175 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 TSC22D2O75157 780 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 METTL15P1P0C7V9 234 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 LINC00869P0C866 280 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 RPL7P18124 248 aaKnown RBP9.84□□□□□ -0.83
TCOF1-215ENST00000515516 BTCP35070 178 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 PAX9P55771 341 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms