RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SPRY2O43597 315 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
CLCN3-210ENST00000515420 SELENOTP62341 195 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 IL15RAQ13261 267 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 OR2F1Q13607 317 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 ZNF124Q15973 351 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 GATAD1Q8WUU5 269 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 NPVFQ9HCQ7 196 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 MGAT4CQ9UBM8 478 aa9.41□□□□□ -0.9
CLCN3-210ENST00000515420 SMCO3A2RU48 225 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 L7N2F9 121 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 ZNF688P0C7X2 276 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
CLCN3-210ENST00000515420 PVALBP20472 110 aaPredicted RBP9.4□□□□□ -0.9
CLCN3-210ENST00000515420 PLP1P60201 277 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 VAMP2P63027 116 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 SAMD13Q5VXD3 122 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 LEMD1Q68G75 181 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 NRARPQ7Z6K4 114 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 STHQ8IWL8 128 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 GPR82Q96P67 336 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 C11orf1Q9H5F2 150 aa9.4□□□□□ -0.9
CLCN3-210ENST00000515420 AGRNO00468 2067 aa9.4□□□□□ -0.91
CLCN3-210ENST00000515420 DEDDO75618 318 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 CCNKO75909 580 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 SPP1P10451 314 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 MEOX2P50222 304 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
CLCN3-210ENST00000515420 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 S100A7AQ86SG5 101 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 TRPT1Q86TN4 253 aaKnown RBP9.39□□□□□ -0.91
CLCN3-210ENST00000515420 PPP1R14BQ96C90 147 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 MARVELD1Q9BSK0 173 aa9.39□□□□□ -0.91
CLCN3-210ENST00000515420 LSM5Q9Y4Y9 91 aaKnown RBP9.39□□□□□ -0.91
CLCN3-210ENST00000515420 INMT-MINDY4F8WBC2 141 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 ID1P41134 155 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 GALR1P47211 349 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 PSMB3P49720 205 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 RRAS2P62070 204 aaPredicted RBP9.38□□□□□ -0.91
CLCN3-210ENST00000515420 PSMG4Q5JS54 123 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 PXDC1Q5TGL8 231 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 OR8I2Q8N0Y5 310 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 TMEM147Q9BVK8 224 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 LYRM2Q9NU23 88 aaPredicted RBP9.38□□□□□ -0.91
CLCN3-210ENST00000515420 RNF24Q9Y225 148 aa9.38□□□□□ -0.91
CLCN3-210ENST00000515420 KMT2CQ8NEZ4 4911 aaKnown RBP9.38□□□□□ -0.91
CLCN3-210ENST00000515420 ZNF98A6NK75 572 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 ISLRO14498 428 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 CA1P00915 261 aaPredicted RBP9.37□□□□□ -0.91
CLCN3-210ENST00000515420 LINC00869P0C866 280 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 ORM2P19652 201 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
CLCN3-210ENST00000515420 CAV2P51636 162 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 RAP2BP61225 183 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
CLCN3-210ENST00000515420 ARL16Q0P5N6 197 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 RAB32Q13637 225 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 TMEM182Q6ZP80 229 aaPredicted RBP9.37□□□□□ -0.91
CLCN3-210ENST00000515420 ZNF546Q86UE3 836 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 OR1B1Q8NGR6 318 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 NMES1Q9C002 83 aa9.37□□□□□ -0.91
CLCN3-210ENST00000515420 H3BRN7 92 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 SOCS3O14543 225 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 SULT1A1P50225 295 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 BCAP31P51572 246 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 S100A10P60903 97 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 TMEM217Q8N7C4 229 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
CLCN3-210ENST00000515420 SLC25A32Q9H2D1 315 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
CLCN3-210ENST00000515420 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 AGPAT2O15120 278 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 HYPMO75409 117 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 HLA-DRB4P13762 266 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 S100A11P31949 105 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
CLCN3-210ENST00000515420 HBG1P69891 147 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 HBG2P69892 147 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 STX12Q86Y82 276 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 TMEM252Q8N6L7 170 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 CLUHP3Q96NS8 147 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 RARRES2Q99969 163 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
CLCN3-210ENST00000515420 SLC25A22Q9H936 323 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 HLA-DRB4X5D2U9 266 aa9.35□□□□□ -0.91
CLCN3-210ENST00000515420 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 FAM24AA6NFZ4 105 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 H3BMM0 161 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 GOSR2O14653 212 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 RLN2P04090 185 aa9.34□□□□□ -0.91
CLCN3-210ENST00000515420 RPL7P18124 248 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms