RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 ELOA3CA0A087WX78 387 aaPredicted RBP12.85□□□□□ -0.35
AP3S1-208ENST00000515066 LINC01619G3V211 115 aa12.85□□□□□ -0.35
AP3S1-208ENST00000515066 COX7A2P2O60397 106 aa12.85□□□□□ -0.35
AP3S1-208ENST00000515066 HYPMO75409 117 aa12.85□□□□□ -0.35
AP3S1-208ENST00000515066 OR1N2Q8NGR9 330 aa12.85□□□□□ -0.35
AP3S1-208ENST00000515066 PFDN5Q99471 154 aa12.85□□□□□ -0.35
AP3S1-208ENST00000515066 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
AP3S1-208ENST00000515066 SLURP1P55000 103 aa12.84□□□□□ -0.35
AP3S1-208ENST00000515066 FAM78BQ5VT40 261 aa12.84□□□□□ -0.35
AP3S1-208ENST00000515066 C10orf113Q5VZT2 155 aa12.84□□□□□ -0.35
AP3S1-208ENST00000515066 LINC00305Q7Z4B0 112 aa12.84□□□□□ -0.35
AP3S1-208ENST00000515066 OR1L4Q8NGR5 311 aa12.84□□□□□ -0.35
AP3S1-208ENST00000515066 FAM213BQ8TBF2 198 aa12.84□□□□□ -0.35
AP3S1-208ENST00000515066 PCNPQ8WW12 178 aaKnown RBP12.84□□□□□ -0.35
AP3S1-208ENST00000515066 NMBP08949 121 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 ZP3P21754 424 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.35
AP3S1-208ENST00000515066 NSUN5P1Q3KNT7 163 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 FAM122CQ6P4D5 195 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 RAB24Q969Q5 203 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 C20orf24Q9BUV8 137 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 SLC25A39Q9BZJ4 359 aaPredicted RBP12.83□□□□□ -0.35
AP3S1-208ENST00000515066 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.35
AP3S1-208ENST00000515066 TRRAPQ9Y4A5 3859 aa12.83□□□□□ -0.36
AP3S1-208ENST00000515066 ZNF705EA8MWA4 302 aaPredicted RBP12.83□□□□□ -0.36
AP3S1-208ENST00000515066 CCL24O00175 119 aa12.83□□□□□ -0.36
AP3S1-208ENST00000515066 CDC34P49427 236 aaPredicted RBP12.83□□□□□ -0.36
AP3S1-208ENST00000515066 SYNJ2BPP57105 145 aa12.83□□□□□ -0.36
AP3S1-208ENST00000515066 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
AP3S1-208ENST00000515066 TMEM158Q8WZ71 300 aa12.83□□□□□ -0.36
AP3S1-208ENST00000515066 FUT9Q9Y231 359 aa12.83□□□□□ -0.36
AP3S1-208ENST00000515066 ZNF320A2RRD8 509 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 H3BRN7 92 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 HMGB3O15347 200 aaKnown RBP12.82□□□□□ -0.36
AP3S1-208ENST00000515066 ZNF207O43670 478 aaKnown RBP12.82□□□□□ -0.36
AP3S1-208ENST00000515066 RHOBP62745 196 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 FAM106AQ4KMX7 169 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 LEMD1Q68G75 181 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 REC114Q7Z4M0 266 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 DPF1Q92782 380 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 RABAC1Q9UI14 185 aa12.82□□□□□ -0.36
AP3S1-208ENST00000515066 CTXND1A0A1B0GTU2 59 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 A8MWP6 167 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 LGALS9O00182 355 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 EDN2P20800 178 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 CRYBB3P26998 211 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 TM4SF20Q53R12 229 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
AP3S1-208ENST00000515066 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 RNF2Q99496 336 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
AP3S1-208ENST00000515066 ACTR3CQ9C0K3 210 aaPredicted RBP12.81□□□□□ -0.36
AP3S1-208ENST00000515066 DAZ1Q9NQZ3 744 aaKnown RBP12.81□□□□□ -0.36
AP3S1-208ENST00000515066 U3KQE9 123 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 NOTCH3Q9UM47 2321 aa12.81□□□□□ -0.36
AP3S1-208ENST00000515066 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 APOHP02749 345 aaPredicted RBP12.8□□□□□ -0.36
AP3S1-208ENST00000515066 MBD3L1Q8WWY6 194 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 DLX4Q92988 240 aaPredicted RBP12.8□□□□□ -0.36
AP3S1-208ENST00000515066 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 SLC25A2Q9BXI2 301 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 STAG3L2P0CL84 134 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 STAG3L3P0CL85 134 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 LRRC20Q8TCA0 184 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 METTL26Q96S19 204 aa12.8□□□□□ -0.36
AP3S1-208ENST00000515066 IGHV3-49A0A0A0MS15 119 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 MAP1LC3B2A6NCE7 125 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 K7EMT4 169 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 BUB3O43684 328 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 NPPCP23582 126 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 SFT2D1Q8WV19 159 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 ZNF747Q9BV97 191 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 MAP1LC3BQ9GZQ8 125 aa12.79□□□□□ -0.36
AP3S1-208ENST00000515066 IGHV3OR16-13A0A075B7E8 117 aa12.78□□□□□ -0.36
AP3S1-208ENST00000515066 IGHV3-74A0A0B4J1X5 117 aa12.78□□□□□ -0.36
AP3S1-208ENST00000515066 C8orf88P0DMB2 117 aa12.78□□□□□ -0.36
AP3S1-208ENST00000515066 FGF8P55075 233 aaPredicted RBP12.78□□□□□ -0.36
AP3S1-208ENST00000515066 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
AP3S1-208ENST00000515066 CLLU1Q5K131 121 aa12.78□□□□□ -0.36
AP3S1-208ENST00000515066 TECRQ9NZ01 308 aaKnown RBP12.78□□□□□ -0.36
AP3S1-208ENST00000515066 UFC1Q9Y3C8 167 aa12.78□□□□□ -0.36
AP3S1-208ENST00000515066 TRAV1-1A0A0B4J248 108 aa12.77□□□□□ -0.36
AP3S1-208ENST00000515066 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.36
AP3S1-208ENST00000515066 ADAMTSL5Q6ZMM2 481 aa12.77□□□□□ -0.36
AP3S1-208ENST00000515066 IGHV3-66A0A0C4DH42 116 aa12.77□□□□□ -0.37
AP3S1-208ENST00000515066 IGHV7-4-1A0A0J9YVY3 117 aa12.77□□□□□ -0.37
AP3S1-208ENST00000515066 A0A1B0GV50 99 aa12.77□□□□□ -0.37
AP3S1-208ENST00000515066 MRPS12O15235 138 aaKnown RBP12.77□□□□□ -0.37
AP3S1-208ENST00000515066 GP9P14770 177 aa12.77□□□□□ -0.37
AP3S1-208ENST00000515066 MYCNOSP40205 109 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms