RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-221	ENST00000515056	SAA1	P0DJI8	122 aa	Predicted RBP	11.77	□□□□□ -0.53
APBB3-221	ENST00000515056	IER3	P46695	156 aa		11.77	□□□□□ -0.53
APBB3-221	ENST00000515056	TMEM200B	Q69YZ2	307 aa		11.77	□□□□□ -0.53
APBB3-221	ENST00000515056	NDUFA4L2	Q9NRX3	87 aa		11.77	□□□□□ -0.53
APBB3-221	ENST00000515056	TRBV20OR9-2	A0A075B6H5	130 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	SCO2	A0A1W2PP80	73 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056		H0YJW9	148 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	RNASE2	P10153	161 aa	Known RBP	11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	MYOD1	P15172	320 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	GPR6	P46095	362 aa	Predicted RBP	11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	SPATA31B1P	Q5VZV4	182 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	OCC1	Q8TAD7	63 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	C10orf105	Q8TEF2	133 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	TMEM186	Q96B77	213 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	TIMD4	Q96H15	378 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	WNT10A	Q9GZT5	417 aa		11.76	□□□□□ -0.53
APBB3-221	ENST00000515056	PRSS47	A8MTI9	375 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	FSTL3	O95633	263 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	USF1	P22415	310 aa	Predicted RBP	11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	S100A7	P31151	101 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	DSCR9	P59020	149 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	PQLC2	Q6ZP29	291 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	VSTM2A	Q8TAG5	236 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	BORCS7	Q96B45	105 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	NABP2	Q9BQ15	211 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	MRPL20	Q9BYC9	149 aa	Known RBP	11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	BPESC1	Q9GZL8	116 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	TECR	Q9NZ01	308 aa	Known RBP	11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	KAAG1	Q9UBP8	84 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	PGPEP1L	A6NFU8	196 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	NDUFB3	O43676	98 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	PMCH	P20382	165 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	ERH	P84090	104 aa	Known RBP	11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	CD69	Q07108	199 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	RPEL1	Q2QD12	228 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	PET117	Q6UWS5	81 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	PRSS57	Q6UWY2	283 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	PDPN	Q86YL7	162 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	TMEM167A	Q8TBQ9	72 aa		11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	FLYWCH2	Q96CP2	140 aa	Known RBP	11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.75	□□□□□ -0.53
APBB3-221	ENST00000515056	MYO9A	B2RTY4	2548 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	IGHV4-30-2	A0A087WSY4	118 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	CORT	O00230	105 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	FOXH1	O75593	365 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	BMI1	P35226	326 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	ZNF137P	P52743	207 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	TAS2R45	P59539	299 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	RPL8	P62917	257 aa	Known RBP	11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	DEFB125	Q8N687	156 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	OR4C13	Q8NGP0	309 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	HARBI1	Q96MB7	349 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	FOXC2	Q99958	501 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	CLEC7A	Q9BXN2	247 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	COMMD5	Q9GZQ3	224 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	FCN3	O75636	299 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056		Q5PR19	223 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	TMEM136	Q6ZRR5	245 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	MIR17HG	Q75NE6	70 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	TSKU	Q8WUA8	353 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	RCHY1	Q96PM5	261 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	PIMREG	Q9BSJ6	248 aa		11.74	□□□□□ -0.53
APBB3-221	ENST00000515056	AKAP9	Q99996	3911 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	IGKV1OR2-108	A0A075B7D4	117 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	VWC2L	B2RUY7	222 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	CCL3L1	P16619	93 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	KRTAP1-3	Q8IUG1	177 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	MMD2	Q8IY49	270 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	ST6GALNAC6	Q969X2	333 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	MRPL32	Q9BYC8	188 aa	Known RBP	11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	ZNRD1	Q9P1U0	126 aa		11.73	□□□□□ -0.53
APBB3-221	ENST00000515056	MALRD1	Q5VYJ5	2156 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	IGLL1	P15814	213 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	CX3CL1	P78423	397 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	LYPD2	Q6UXB3	125 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	MEGF9	Q9H1U4	602 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	NAT8B	Q9UHF3	227 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	GAGE12B	A1L429	117 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	SLC17A3	O00476	420 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	OR10J4	P0C629	311 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	DLX6	P56179	175 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	PSG5	Q15238	335 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	TMEM155	Q4W5P6	130 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	AMMECR1L	Q6DCA0	310 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	OR10X1	Q8NGY0	326 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	EAF1	Q96JC9	268 aa	Predicted RBP	11.72	□□□□□ -0.53
APBB3-221	ENST00000515056		V9GYV3	84 aa		11.72	□□□□□ -0.53
APBB3-221	ENST00000515056	ITPR3	Q14573	2671 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056		A0A1W2PRE2	83 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056		K7EN84	100 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	FRMD6-AS1	P0C7T7	363 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	MC5R	P33032	325 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	SUB1	P53999	127 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	OR8B3	Q8NGG8	313 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	OR9G1	Q8NH87	305 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	OR8B2	Q96RD0	313 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	WASHC3	Q9Y3C0	194 aa		11.71	□□□□□ -0.53
APBB3-221	ENST00000515056	ACTL6B	O94805	426 aa		11.71	□□□□□ -0.54
APBB3-221	ENST00000515056	C8orf88	P0DMB2	117 aa		11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms