RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 HYPMO75409 117 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 YIF1AO95070 293 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 SEC11BP0C7V7 166 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 NPPCP23582 126 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 GATA2P23769 480 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 NKX2-5P52952 324 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 PRR31Q5SQ13 230 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 C1orf194Q5T5A4 169 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 PATE2Q6UY27 113 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 HSD17B11Q8NBQ5 300 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 OR1L4Q8NGR5 311 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 METTL26Q96S19 204 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 MCRIP2Q9BUT9 160 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 ELOVL1Q9BW60 279 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 ZNF471Q9BX82 626 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 VSIRQ9H7M9 311 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 RABAC1Q9UI14 185 aa9.11□□□□□ -0.95
PDLIM5-220ENST00000514830 IGHV7-4-1A0A0J9YVY3 117 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 MBP02144 154 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 CSN3P07498 182 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 CBLN1P23435 193 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 BMI1P35226 326 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 INSL3P51460 131 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 LYZP61626 148 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 EIF5AL1Q6IS14 154 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 TMEM37Q8WXS4 190 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 PHYHIPLQ96FC7 376 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 RNF2Q99496 336 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 DNAJC4Q9NNZ3 241 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 SMPXQ9UHP9 88 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 HIGD1AQ9Y241 93 aa9.1□□□□□ -0.95
PDLIM5-220ENST00000514830 TRRAPQ9Y4A5 3859 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 A0A1W2PS18 150 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 H3BRN7 92 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 BUB3O43684 328 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 CD5P06127 495 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 OR5G3P0C626 314 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 FOLR2P14207 255 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 M6PRP20645 277 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 ACOT6Q3I5F7 207 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 ADAMTSL5Q6ZMM2 481 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 ST8SIA2Q92186 375 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 C20orf24Q9BUV8 137 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 MRPL32Q9BYC8 188 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 SH3BGRL3Q9H299 93 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 TECRQ9NZ01 308 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-220ENST00000514830 SEC14L6B5MCN3 397 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 UMAD1C9J7I0 102 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 CHEK1O14757 476 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 COX7A2P2O60397 106 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 ORM2P19652 201 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 DEFA6Q01524 100 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 OR2K2Q8NGT1 345 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 GRAMD2BQ96HH9 432 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 GPR82Q96P67 336 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 PBDC1Q9BVG4 233 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 SLC25A39Q9BZJ4 359 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 GPR61Q9BZJ8 451 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
PDLIM5-220ENST00000514830 IGHV3OR16-8A0A075B7F1 116 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 ZNF98A6NK75 572 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 CD33P20138 364 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 TMEM41BQ5BJD5 291 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 C16orf54Q6UWD8 224 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 DPPA3Q6W0C5 159 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 LINC00305Q7Z4B0 112 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 RHPN1-AS1Q9BWJ2 59 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 TGP01266 2768 aa9.07□□□□□ -0.96
PDLIM5-220ENST00000514830 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 ZNF207O43670 478 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 IGLV1-51P01701 117 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 APOHP02749 345 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 RAB5CP51148 216 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 RHOBP62745 196 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 GLMPQ8WWB7 406 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 FUT9Q9Y231 359 aa9.06□□□□□ -0.96
PDLIM5-220ENST00000514830 HELTA6NFD8 242 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 RAB2AP61019 212 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 DEFB114Q30KQ6 69 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 FAM78BQ5VT40 261 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms