RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RRN3P1Q2M238 152 aa1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 CEP19Q96LK0 163 aa1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 MRPL57Q9BQC6 102 aaKnown RBP1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 C14orf132Q9NPU4 83 aa1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 SIP14410 1827 aa1.05□□□□□ -2.24
HMGCS1-207ENST00000514610 ZNF736B4DX44 427 aaPredicted RBP1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 NDUFB3O43676 98 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 BANF1O75531 89 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 IFNA7P01567 189 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 BCL2L15Q5TBC7 163 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 TEX261Q6UWH6 196 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 PDZD9Q8IXQ8 264 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 Q8IYB0 196 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 Q8N814 137 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 TEX47Q8TBZ9 253 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 CDC42SE1Q9NRR8 79 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 U3KQ87 197 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 ARHGEF11O15085 1522 aa1.04□□□□□ -2.24
HMGCS1-207ENST00000514610 TAX1BP3O14907 124 aa1.03□□□□□ -2.24
HMGCS1-207ENST00000514610 HACD4Q5VWC8 232 aa1.03□□□□□ -2.24
HMGCS1-207ENST00000514610 PXT1Q8NFP0 134 aa1.03□□□□□ -2.24
HMGCS1-207ENST00000514610 MED29Q9NX70 200 aa1.03□□□□□ -2.24
HMGCS1-207ENST00000514610 LAMB4A4D0S4 1761 aa1.03□□□□□ -2.24
HMGCS1-207ENST00000514610 LAMA4Q16363 1823 aa1.03□□□□□ -2.25
HMGCS1-207ENST00000514610 TRGV10A0A0A0MS01 117 aa1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 TMEM256-PLSCR3K7ERE1 68 aa1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 HSPE1P61604 102 aaKnown RBP1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 UBE2BP63146 152 aa1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 C22orf39Q6P5X5 142 aa1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 TMEM254Q8TBM7 123 aa1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 TMEM126AQ9H061 195 aa1.02□□□□□ -2.25
HMGCS1-207ENST00000514610 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 M0R2N4 97 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 DNAL4O96015 105 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 ZNF25P17030 456 aaPredicted RBP1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 HOXA6P31267 233 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 NCALDP61601 193 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 BASP1P80723 227 aaKnown RBP1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 SPRNQ5BIV9 151 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 DHRS4L2Q6PKH6 230 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 OR2T35Q8NGX2 323 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 LINC00526Q96FQ7 95 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 SLC25A21Q9BQT8 299 aaPredicted RBP1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 IMUPQ9GZP8 106 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 ARL5AQ9Y689 179 aa1.01□□□□□ -2.25
HMGCS1-207ENST00000514610 FBN2P35556 2912 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 ATG12O94817 140 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 C1QBP02746 253 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 MPV17LQ2QL34 196 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 GDF5OSQ5U4N7 250 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 ST6GALNAC3Q8NDV1 305 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 YPEL2Q96QA6 119 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 TAS2R7Q9NYW3 318 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 MGAMO43451 1857 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 ASCC3Q8N3C0 2202 aaKnown RBP1□□□□□ -2.25
HMGCS1-207ENST00000514610 ADGRB2O60241 1585 aa1□□□□□ -2.25
HMGCS1-207ENST00000514610 NOTCH1P46531 2555 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 G3V2T6 193 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 M0R378 163 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 INE1O15225 51 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 GGCTO75223 188 aaKnown RBP0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 CD2P06729 351 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 EXOC3-AS1Q8N2X6 119 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 OR10K1Q8NGX5 313 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 BORCS5Q969J3 196 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 LINC00467Q9BRT7 94 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 SS18L2Q9UHA2 77 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 PYCARDQ9ULZ3 195 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 PHRF1Q9P1Y6 1649 aaKnown RBP0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 FANCMQ8IYD8 2048 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 CNTRLQ7Z7A1 2325 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 CEP164Q9UPV0 1460 aa0.99□□□□□ -2.25
HMGCS1-207ENST00000514610 TCRBV4S1A1TA0A5B7 111 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 DHFRP00374 187 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 DYNLT3P51808 116 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 GNG5P63218 68 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 FAM74A1Q5RGS3 127 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 OR5D14Q8NGL3 314 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 CDC26Q8NHZ8 85 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 C4orf3Q8WVX3 66 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 PATE1Q8WXA2 126 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 GPER1Q99527 375 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 NPCDR1Q9BY65 106 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 PSTPIP2Q9H939 334 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 PCTPQ9UKL6 214 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 CHCHD2Q9Y6H1 151 aaPredicted RBP0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 TNS3Q68CZ2 1445 aa0.98□□□□□ -2.25
HMGCS1-207ENST00000514610 TLCD2A6NGC4 264 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 A8MWV9 139 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 B4DSR2 109 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 NDUFC2O95298 119 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 NFYBP25208 207 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 ROMO1P60602 79 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 ARF6P62330 175 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 MYL5Q02045 173 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 SNCBQ16143 134 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 ANKRD31Q8N7Z5 1873 aa0.97□□□□□ -2.25
HMGCS1-207ENST00000514610 COL24A1Q17RW2 1714 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms