RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PPP1CCP36873 323 aaKnown RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 SRP14P37108 136 aaKnown RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 EFNA4P52798 201 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 AKR1C2P52895 323 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 TCL1AP56279 114 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 LSM6P62312 80 aaKnown RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 MRPS15P82914 257 aaKnown RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 EMX1Q04741 257 aaPredicted RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 RSU1Q15404 277 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 SPANXN3Q5MJ09 141 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 NCMAPQ5T1S8 102 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 C1orf174Q8IYL3 243 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 LYPD1Q8N2G4 141 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 TEX29Q8N6K0 151 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 ZNF418Q8TF45 676 aaPredicted RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 POPDC3Q9HBV1 291 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 CBLN4Q9NTU7 201 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 EMC3Q9P0I2 261 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 CARHSP1Q9Y2V2 147 aaKnown RBP2.67□□□□□ -1.98
RFC1-216ENST00000514572 DOCK11Q5JSL3 2073 aa2.67□□□□□ -1.98
RFC1-216ENST00000514572 A0A096LNT2 108 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 TMED7-TICAM2A0A0A6YYA0 188 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 CLPSP04118 112 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 RNASE2P10153 161 aaKnown RBP2.66□□□□□ -1.98
RFC1-216ENST00000514572 CPMP14384 443 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 CEBPGP53567 150 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 TSPEAR-AS2P59090 65 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 TSNQ15631 228 aaKnown RBP2.66□□□□□ -1.98
RFC1-216ENST00000514572 ZNF141Q15928 474 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 NNATQ16517 81 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 HIST3H3Q16695 136 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 FAM78BQ5VT40 261 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 LY6G5BQ8NDX9 201 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 C10orf105Q8TEF2 133 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 SLC25A44Q96H78 314 aaPredicted RBP2.66□□□□□ -1.98
RFC1-216ENST00000514572 NKX6-2Q9C056 277 aaPredicted RBP2.66□□□□□ -1.98
RFC1-216ENST00000514572 ABCG5Q9H222 651 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 C16orf95Q9H693 158 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 OPTCQ9UBM4 332 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 VPREB3Q9UKI3 123 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 HHLA2Q9UM44 414 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 ZNF337Q9Y3M9 751 aa2.66□□□□□ -1.98
RFC1-216ENST00000514572 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
RFC1-216ENST00000514572 A0A1W2PQL4 384 aaPredicted RBP2.65□□□□□ -1.99
RFC1-216ENST00000514572 IGSF23A1L1A6 192 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 ZNF22P17026 224 aaPredicted RBP2.65□□□□□ -1.99
RFC1-216ENST00000514572 CCL1P22362 96 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 COL8A2P25067 703 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 CRABP1P29762 137 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 SNRPD2P62316 118 aaKnown RBP2.65□□□□□ -1.99
RFC1-216ENST00000514572 SAPCD1Q5SSQ6 148 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 SDIM1Q6ZPB5 146 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 C1orf158Q8N1D5 194 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 TMEM86BQ8N661 226 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 OR10P1Q8NGE3 313 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 MFSD8Q8NHS3 518 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 STAG3L4Q8TBR4 150 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 PPP1R14BQ96C90 147 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 SLC35G5Q96KT7 338 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 SERPINI1Q99574 410 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 TMEM109Q9BVC6 243 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 OR51V1Q9H2C8 321 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 ASB4Q9Y574 426 aa2.65□□□□□ -1.99
RFC1-216ENST00000514572 DPRXA6NFQ7 191 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 B4DSR2 109 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 KRT75O95678 551 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 TCRBP04435 133 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 RPS17P08708 135 aaKnown RBP2.64□□□□□ -1.99
RFC1-216ENST00000514572 TMEM33P57088 247 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 ERVS71-1P61550 626 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 RANP62826 216 aaKnown RBP2.64□□□□□ -1.99
RFC1-216ENST00000514572 STX5Q13190 355 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 UAP1Q16222 522 aaPredicted RBP2.64□□□□□ -1.99
RFC1-216ENST00000514572 PLPPR5Q32ZL2 321 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 C8orf74Q6P047 294 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 SLC48A1Q6P1K1 146 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 ZNF664Q8N3J9 261 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 OR52R1Q8NGF1 315 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 ZNF675Q8TD23 568 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 MAGOHBQ96A72 148 aaKnown RBP2.64□□□□□ -1.99
RFC1-216ENST00000514572 TM2D3Q9BRN9 247 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 OR51I2Q9H344 312 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 MED11Q9P086 117 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 SLC22A13Q9Y226 551 aa2.64□□□□□ -1.99
RFC1-216ENST00000514572 IGLV3-32A0A0A0MS00 114 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 TGIF2-C20orf24A0A0A6YYL0 155 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 LOC102725191A0A1B0GVB3 256 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 A0A1W2PNN7 141 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 OR6C6A6NF89 314 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 C17orf98A8MV24 154 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 A8MWP6 167 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 E7EQL1 145 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 GSTZ1O43708 216 aaPredicted RBP2.63□□□□□ -1.99
RFC1-216ENST00000514572 FADS1O60427 444 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 LYZL6O75951 148 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 RPP14O95059 124 aaKnown RBP2.63□□□□□ -1.99
RFC1-216ENST00000514572 APOMO95445 188 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 CRYGDP07320 174 aa2.63□□□□□ -1.99
RFC1-216ENST00000514572 NPPCP23582 126 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms