RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ELLP55199 621 aaPredicted RBP6.41□□□□□ -1.38
CCL28-204ENST00000514421 RHOGP84095 191 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 FHL3Q13643 280 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 SOHLH1Q5JUK2 328 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 SAMD5Q5TGI4 173 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 ZNF343Q6P1L6 599 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 FAM223AQ8IWN6 122 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 NECAP1Q8NC96 275 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 OR1P1Q8NH06 330 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 SUN5Q8TC36 379 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 HINT2Q9BX68 163 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 GPR61Q9BZJ8 451 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 TUBA4BQ9H853 241 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 PEF1Q9UBV8 284 aaKnown RBP6.41□□□□□ -1.38
CCL28-204ENST00000514421 PXMP4Q9Y6I8 212 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 ARL2-SNX15V9GYD0 113 aa6.41□□□□□ -1.38
CCL28-204ENST00000514421 IGHV4OR15-8A0A075B7B6 117 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 A0A087WW49 117 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 G3V4G9 280 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 CORTO00230 105 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 OR2J3O76001 311 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 STAG3L2P0CL84 134 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 STAG3L3P0CL85 134 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 CDC34P49427 236 aaPredicted RBP6.4□□□□□ -1.38
CCL28-204ENST00000514421 RHEBQ15382 184 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 HAGHQ16775 308 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 FAM209BQ5JX69 171 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 ETFRF1Q6IPR1 90 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 LCN15Q6UWW0 184 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 SLC16A13Q7RTY0 426 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 STPG3Q8N7X2 389 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 TMEM116Q8NCL8 245 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 OR1L6Q8NGR2 347 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 FANCD2OSQ96PS1 177 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 TXNDC17Q9BRA2 123 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 FNDC4Q9H6D8 234 aaPredicted RBP6.4□□□□□ -1.38
CCL28-204ENST00000514421 THYN1Q9P016 225 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 GNG13Q9P2W3 67 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 FBXL7Q9UJT9 491 aa6.4□□□□□ -1.38
CCL28-204ENST00000514421 F11RQ9Y624 299 aaKnown RBP6.4□□□□□ -1.38
CCL28-204ENST00000514421 IGLV11-55A0A075B6I3 123 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 IGKV1D-37A0A075B6S9 117 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 A0A087WWC5 75 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.39□□□□□ -1.39
CCL28-204ENST00000514421 FAM74A7A6NL05 159 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 NDUFB8O95169 186 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 REG1AP05451 166 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 OR5G3P0C626 314 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 MFAP2P55001 183 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 CD81P60033 236 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 B2MP61769 119 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 SELENOTP62341 195 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 RHOBP62745 196 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 DEFA6Q01524 100 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
CCL28-204ENST00000514421 C15orf32Q32M92 178 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 FAM74A3Q4VXF1 159 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 KPRPQ5T749 579 aaPredicted RBP6.39□□□□□ -1.39
CCL28-204ENST00000514421 MIC13Q5XKP0 118 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 C1QL4Q86Z23 238 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 DLX4Q92988 240 aaPredicted RBP6.39□□□□□ -1.39
CCL28-204ENST00000514421 SLC25A22Q9H936 323 aa6.39□□□□□ -1.39
CCL28-204ENST00000514421 ZMAT5Q9UDW3 170 aaKnown RBP6.39□□□□□ -1.39
CCL28-204ENST00000514421 A0A1B0GV50 99 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 B4DEV8 164 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 OVOL1O14753 267 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 CXorf1O96002 111 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 HOXD3P31249 432 aaPredicted RBP6.38□□□□□ -1.39
CCL28-204ENST00000514421 INSL3P51460 131 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 SLURP1P55000 103 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 FGF8P55075 233 aaPredicted RBP6.38□□□□□ -1.39
CCL28-204ENST00000514421 PNRC1Q12796 327 aaPredicted RBP6.38□□□□□ -1.39
CCL28-204ENST00000514421 KLF5Q13887 457 aaPredicted RBP6.38□□□□□ -1.39
CCL28-204ENST00000514421 GCSAMLQ5JQS6 135 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 FAM122CQ6P4D5 195 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 C19orf35Q6ZS72 473 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 VN1R17PQ8TDU5 208 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 RXFP4Q8TDU9 374 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 RNF2Q99496 336 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 TRGV9Q99603 122 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 SMCO4Q9NRQ5 59 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 DMRT1Q9Y5R6 373 aa6.38□□□□□ -1.39
CCL28-204ENST00000514421 TRBV7-1A0A0A6YYK4 115 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 A0A1W2PPV4 95 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 C7orf77A4D0Y5 90 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 ZFP92A6NM28 416 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 H3BQ15 152 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 I3L2K1 104 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 PDE6DO43924 150 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 CLN5O75503 358 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 CLEC3BP05452 202 aa6.37□□□□□ -1.39
CCL28-204ENST00000514421 OR10J1P30954 320 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms