RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 MEOX2P50222 304 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 CNN1P51911 297 aaKnown RBP7.52□□□□□ -1.21
DDX41-216ENST00000513562 PIGPP57054 158 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 GABARAPL2P60520 117 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 TRIM16LQ309B1 348 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 BAP18Q8IXM2 172 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 GPX8Q8TED1 209 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 TIMM8BQ9Y5J9 83 aaPredicted RBP7.52□□□□□ -1.21
DDX41-216ENST00000513562 H3BNG1 76 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 DUSP14O95147 198 aaKnown RBP7.51□□□□□ -1.21
DDX41-216ENST00000513562 IFNA5P01569 189 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 UCP1P25874 307 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 TAS2R60P59551 318 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 OR5I1Q13606 314 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 SP6Q3SY56 376 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 RNASE12Q5GAN4 147 aaKnown RBP7.51□□□□□ -1.21
DDX41-216ENST00000513562 GPR141Q7Z602 305 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 LHFPL1Q86WI0 220 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 FAM219AQ8IW50 185 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 SPARTQ8N0X7 666 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 LINC00612Q8N6U2 182 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 RNASE11Q8TAA1 199 aaKnown RBP7.51□□□□□ -1.21
DDX41-216ENST00000513562 C16orf74Q96GX8 76 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 C16orf92Q96LL3 132 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 CNBD2Q96M20 576 aa7.51□□□□□ -1.21
DDX41-216ENST00000513562 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.51□□□□□ -1.21
DDX41-216ENST00000513562 IGKV1D-37A0A075B6S9 117 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 TRAV12-2A0A075B6T6 113 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 A0A0J9YY99 117 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 LOC100506127A0A0U1RQW1 187 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 CEBPZOSA8MTT3 80 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 BOLA2-SMG1P6H3BVE0 249 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 ZNF701M0R085 212 aaPredicted RBP7.5□□□□□ -1.21
DDX41-216ENST00000513562 LYZP61626 148 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 ZNF90Q03938 601 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 NMSQ5H8A3 153 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 NOXA1Q86UR1 476 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 OR8I2Q8N0Y5 310 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 SAMD12Q8N8I0 201 aa7.5□□□□□ -1.21
DDX41-216ENST00000513562 RNASE8Q8TDE3 154 aaKnown RBP7.5□□□□□ -1.21
DDX41-216ENST00000513562 A0A087WTM6 91 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 ZFP92A6NM28 416 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 KRTAP29-1A8MX34 341 aaPredicted RBP7.49□□□□□ -1.21
DDX41-216ENST00000513562 DNAH10OSP0CZ25 163 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 HOXA5P20719 270 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 KLF9Q13886 244 aaPredicted RBP7.49□□□□□ -1.21
DDX41-216ENST00000513562 IZUMO2Q6UXV1 221 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 ZNF493Q6ZR52 646 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 PPP1R14BQ96C90 147 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 LINC01587Q99440 93 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 NOP10Q9NPE3 64 aaKnown RBP7.49□□□□□ -1.21
DDX41-216ENST00000513562 CACNG5Q9UF02 275 aa7.49□□□□□ -1.21
DDX41-216ENST00000513562 B3GALNT1O75752 331 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 CDS2O95674 445 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 GCSHP23434 173 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 GALR1P47211 349 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 HAMPP81172 84 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 SERTAD4-AS1Q5TG53 156 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 TMEM144Q7Z5S9 345 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 CROCCP3Q8IVE0 287 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 ARRDC1Q8N5I2 433 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 LHFPL5Q8TAF8 219 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 TMEM263Q8WUH6 116 aaKnown RBP7.48□□□□□ -1.21
DDX41-216ENST00000513562 SLC25A39Q9BZJ4 359 aaPredicted RBP7.48□□□□□ -1.21
DDX41-216ENST00000513562 SLC25A32Q9H2D1 315 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 COPZ2Q9P299 210 aa7.48□□□□□ -1.21
DDX41-216ENST00000513562 TRAV8-2A0A0B4J237 113 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 SNRPGP15A8MWD9 76 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 SIVA1O15304 175 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 ADAP1O75689 374 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 FABP1P07148 127 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 HTN1P15515 57 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 GAMTQ14353 236 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 CCDC71LQ8N9Z2 235 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 RBPMSQ93062 196 aaKnown RBP7.47□□□□□ -1.21
DDX41-216ENST00000513562 RSG1Q9BU20 258 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 TMEM222Q9H0R3 208 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 Q9H521 79 aa7.47□□□□□ -1.21
DDX41-216ENST00000513562 A0A096LPF7 62 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 OR5AC1P0C628 307 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 ZNF182P17025 639 aaPredicted RBP7.46□□□□□ -1.22
DDX41-216ENST00000513562 OR2F1Q13607 317 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 IGFL4Q6B9Z1 124 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 NFE4Q86UQ8 179 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 SNX29P2Q8IUI4 249 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 RNF182Q8N6D2 247 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 SYT8Q8NBV8 401 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 OR4D5Q8NGN0 318 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 OR13C8Q8NGS7 320 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 ZFAND1Q8TCF1 268 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 GLYATL2Q8WU03 294 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 CACFD1Q9UGQ2 172 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 SLC45A2Q9UMX9 530 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 TNFRSF18Q9Y5U5 241 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 U3KQ87 197 aa7.46□□□□□ -1.22
DDX41-216ENST00000513562 DNAH8Q96JB1 4490 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms