RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 LGALS3P17931 250 aaKnown RBP9.26□□□□□ -0.93
TCOF1-211ENST00000513346 HAPLN4Q86UW8 402 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 LYPD6Q86Y78 171 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 RPRMLQ8N4K4 120 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 ZNF524Q96C55 264 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 CYYR1Q96J86 154 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 MCRIP2Q9BUT9 160 aaKnown RBP9.26□□□□□ -0.93
TCOF1-211ENST00000513346 CHD3Q12873 2000 aaKnown RBP9.26□□□□□ -0.93
TCOF1-211ENST00000513346 KIAA2026Q5HYC2 2103 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 HEATR1Q9H583 2144 aaKnown RBP9.26□□□□□ -0.93
TCOF1-211ENST00000513346 TCRBV4S1A1TA0A5B7 111 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 HOXA3O43365 443 aaPredicted RBP9.26□□□□□ -0.93
TCOF1-211ENST00000513346 HTN1P15515 57 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 BVES-AS1Q5T3Y7 98 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 WDR82Q6UXN9 313 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 FOXL2NBQ6ZUU3 175 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 PRR31Q5SQ13 230 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 C20orf204Q6ZNR8 217 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 TNFRSF14Q92956 283 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
TCOF1-211ENST00000513346 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 FOXI3A8MTJ6 420 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-211ENST00000513346 IQCF6A8MYZ5 107 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 SMAD7O15105 426 aaKnown RBP9.25□□□□□ -0.93
TCOF1-211ENST00000513346 IL18BPO95998 194 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 IGKCP01834 107 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 F2Z2F3 143 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 SS18L1O75177 396 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-211ENST00000513346 ZNF138P52744 262 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 FAM216BQ8N7L0 139 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 SLC25A2Q9BXI2 301 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 IGKV1-39P01597 117 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 IGKV1D-39P04432 117 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 PRSS2P07478 247 aa9.25□□□□□ -0.93
TCOF1-211ENST00000513346 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
TCOF1-211ENST00000513346 LY6EQ16553 131 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 RNASE6Q93091 150 aaKnown RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 VKORC1Q9BQB6 163 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SHANK1Q9Y566 2161 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 HELZP42694 1942 aaKnown RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SAA2-SAA4A0A096LPE2 208 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 K7EP34 96 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 NDUFA3O95167 84 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 PPBPP02775 128 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SAA1P0DJI8 122 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SAA2P0DJI9 122 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 MFAP4P55083 255 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 NEU4Q8WWR8 484 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 RCHY1Q96PM5 261 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SPRR3Q9UBC9 169 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 FOXA2Q9Y261 457 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 PLXNA4Q9HCM2 1894 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 FRMPD3Q5JV73 1810 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 C17orf100A8MU93 164 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 FOXG1P55316 489 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SLAQ13239 276 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SRSF6Q13247 344 aaKnown RBP9.24□□□□□ -0.93
TCOF1-211ENST00000513346 PRSS8Q16651 343 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
TCOF1-211ENST00000513346 IGHV3OR16-10A0A075B7F0 116 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 A8MWV9 139 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 WISP1O95388 367 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 Q6P435 159 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 BEX4Q9NWD9 120 aaPredicted RBP9.23□□□□□ -0.93
TCOF1-211ENST00000513346 LINC00473A8K010 186 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 ID1P41134 155 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 DEFB125Q8N687 156 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 PSPNO60542 156 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 CENPVQ7Z7K6 275 aaPredicted RBP9.23□□□□□ -0.93
TCOF1-211ENST00000513346 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
TCOF1-211ENST00000513346 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 COX8AP10176 69 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 FAM90A1Q86YD7 464 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 TSSC4Q9Y5U2 329 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-211ENST00000513346 RANBP2P49792 3224 aaKnown RBP9.22□□□□□ -0.93
TCOF1-211ENST00000513346 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-211ENST00000513346 SPINK8P0C7L1 97 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 C11orf52Q96A22 123 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 TICRRQ7Z2Z1 1910 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 TM4SF5O14894 197 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 TGFAP01135 160 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 DLX6P56179 175 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 GGNQ86UU5 652 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 LINC00479Q96M42 142 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 PRO3102Q9H379 93 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 TLN1Q9Y490 2541 aaKnown RBP9.22□□□□□ -0.93
TCOF1-211ENST00000513346 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 C10orf126Q8N4M7 172 aa9.22□□□□□ -0.93
TCOF1-211ENST00000513346 DPM3Q9P2X0 92 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms