RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 YPEL1O60688 119 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 CRYGCP07315 174 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 PRR20EP86478 221 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 PRR20CP86479 221 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 PRR20DP86480 221 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 PRR20BP86481 221 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 PRR20AP86496 221 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 C1QL4Q86Z23 238 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 YPEL2Q96QA6 119 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 DICER1Q9UPY3 1922 aaKnown RBP7.3□□□□□ -1.24
VCAN-208ENST00000512590 RNF222A6NCQ9 220 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 H0Y9J4 135 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 C14orf178Q8N769 122 aaPredicted RBP7.3□□□□□ -1.24
VCAN-208ENST00000512590 C18orf12Q96KH6 178 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 SIGLEC8Q9NYZ4 499 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 KIAA0100Q14667 2235 aaKnown RBP7.3□□□□□ -1.24
VCAN-208ENST00000512590 IGKV1-16P04430 117 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 HERV-K104P63124 156 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 FAM120AOSQ5T036 256 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 LHFPL4Q7Z7J7 247 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 ARFGEF2Q9Y6D5 1785 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 ANKRD36CQ5JPF3 1778 aa7.3□□□□□ -1.24
VCAN-208ENST00000512590 UBE2V2Q15819 145 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 CD300LDQ6UXZ3 194 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 STPG2Q8N412 459 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 C11orf45Q8TAV5 145 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 BUB1B-PAK6H3BSN5 160 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 LINC01551Q86U37 167 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 SIGLEC9Q9Y336 463 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 RPL34P49207 117 aaKnown RBP7.29□□□□□ -1.24
VCAN-208ENST00000512590 A0A1B0GTI1 187 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 ELANEP08246 267 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 EPDR1Q9UM22 224 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 BAZ2AQ9UIF9 1905 aaKnown RBP7.29□□□□□ -1.24
VCAN-208ENST00000512590 ZNF831Q5JPB2 1677 aa7.29□□□□□ -1.24
VCAN-208ENST00000512590 TRAV12-1A0A0B4J245 112 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 IGHV2-70DA0A0C4DH43 119 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 AHDC1Q5TGY3 1603 aaPredicted RBP7.28□□□□□ -1.24
VCAN-208ENST00000512590 NUP188Q5SRE5 1749 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 LYL1P12980 280 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 PLSCR4Q9NRQ2 329 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 VPREB3Q9UKI3 123 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 IGHG4P01861 327 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 TFF3Q07654 80 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 LIME1Q9H400 295 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 MORN2Q502X0 79 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 Q96M66 194 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 A0A0G2JK05 382 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 IZUMO1RA6ND01 250 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 HIGD1CA8MV81 97 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 PRB2P02812 416 aaPredicted RBP7.28□□□□□ -1.24
VCAN-208ENST00000512590 TFF1P04155 84 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 SPATA31B1PQ5VZV4 182 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 SHISA2Q6UWI4 295 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 C5orf24Q7Z6I8 188 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 IGFBPL1Q8WX77 278 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
VCAN-208ENST00000512590 ICE1Q9Y2F5 2266 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 IGKV2-24A0A0C4DH68 120 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 A8MXK9 166 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 OR11H6Q8NGC7 330 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 WBP1Q96G27 269 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 IGFBP3P17936 291 aaPredicted RBP7.27□□□□□ -1.25
VCAN-208ENST00000512590 SCN11AQ9UI33 1791 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 ABCA4P78363 2273 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 RNASE2P10153 161 aaKnown RBP7.27□□□□□ -1.25
VCAN-208ENST00000512590 MP68P56378 58 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 ZNF124Q15973 351 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 IGHV1OR15-1A0A075B7D0 117 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 OCIAD2Q56VL3 154 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 C8orf86Q6ZUL3 223 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 ANAPC13Q9BS18 74 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 GLI3P10071 1580 aa7.27□□□□□ -1.25
VCAN-208ENST00000512590 M0R2N4 97 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 NPSP0C0P6 89 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 FSTP19883 344 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 FHL1Q13642 323 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 SLC25A48Q6ZT89 311 aaKnown RBP7.26□□□□□ -1.25
VCAN-208ENST00000512590 IFI27L1Q96BM0 104 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 MYH13Q9UKX3 1938 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 A0A1B0GWJ7 208 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 PMS2P5A8MQ11 134 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 ATP6V0E1O15342 81 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 EFNB3Q15768 340 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 ESM1Q9NQ30 184 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 MRPL27Q9P0M9 148 aaKnown RBP7.26□□□□□ -1.25
VCAN-208ENST00000512590 I3L3M4 83 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 PRTN3P24158 256 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 PPP1R3EQ9H7J1 279 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 A0A087WZ39 114 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 PYYP10082 97 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 ZNF345Q14585 488 aa7.26□□□□□ -1.25
VCAN-208ENST00000512590 DEFB112Q30KQ8 113 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms