RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 LINC01551Q86U37 167 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 C11orf42Q8N5U0 333 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 NPBQ8NG41 125 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 OR51G1Q8NGK1 321 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 SRSF12Q8WXF0 261 aaKnown RBP7.56□□□□□ -1.2
MSH3-203ENST00000512531 NPIPB3Q92617 1050 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 YPEL4Q96NS1 127 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 RASL11BQ9BPW5 248 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 SLC25A33Q9BSK2 321 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 OR51M1Q9H341 326 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 SEPSECSQ9HD40 501 aaKnown RBP7.56□□□□□ -1.2
MSH3-203ENST00000512531 ZNRD1Q9P1U0 126 aa7.56□□□□□ -1.2
MSH3-203ENST00000512531 TGIF2-C20orf24A0A0A6YYL0 155 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 IGLC7A0M8Q6 106 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 LY6LH3BQJ8 138 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 MYOD1P15172 320 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 HIST1H1BP16401 226 aaKnown RBP7.55□□□□□ -1.2
MSH3-203ENST00000512531 MEOX2P50222 304 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 SCGB2A2Q13296 93 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 OR5AU1Q8NGC0 362 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 OR2T6Q8NHC8 308 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 RBM14Q96PK6 669 aaKnown RBP7.55□□□□□ -1.2
MSH3-203ENST00000512531 GAR1Q9NY12 217 aaKnown RBP7.55□□□□□ -1.2
MSH3-203ENST00000512531 PITPNC1Q9UKF7 332 aa7.55□□□□□ -1.2
MSH3-203ENST00000512531 TRBV9A0A0B4J1U6 114 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 TIMM23O14925 209 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 GGCTO75223 188 aaKnown RBP7.54□□□□□ -1.2
MSH3-203ENST00000512531 FCN3O75636 299 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 TYMSP04818 313 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 CRYGCP07315 174 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 CDX1P47902 265 aaPredicted RBP7.54□□□□□ -1.2
MSH3-203ENST00000512531 NDUFA6P56556 154 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 PLP1P60201 277 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 UBE2G1P62253 170 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 DIAPH2-AS1Q14236 149 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 RPEL1Q2QD12 228 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 ZNF343Q6P1L6 599 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 LINC00305Q7Z4B0 112 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 LINC01356Q8N9X3 169 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 OR5T1Q8NG75 326 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 OR1B1Q8NGR6 318 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 TMEM68Q96MH6 324 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 C12orf57Q99622 126 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 PYGO2Q9BRQ0 406 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 BPESC1Q9GZL8 116 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 HIGD1AQ9Y241 93 aa7.54□□□□□ -1.2
MSH3-203ENST00000512531 K7EQM0 130 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 LY6HO94772 140 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 TOX4O94842 621 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 NDUFA3O95167 84 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 IGHV2-5P01817 119 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 TRGC2P03986 189 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 PFN1P07737 140 aaKnown RBP7.53□□□□□ -1.2
MSH3-203ENST00000512531 CXCL1P09341 107 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 HOXA5P20719 270 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 ZNF90Q03938 601 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 FXYD3Q14802 87 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 C19orf54Q5BKX5 351 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 HCP5Q6MZN7 132 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 WDR73Q6P4I2 378 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 C12orf54Q6X4T0 127 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 IL17RELQ6ZVW7 336 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 TEX29Q8N6K0 151 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 NECAP1Q8NC96 275 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 SGMS2Q8NHU3 365 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 FBXL15Q9H469 300 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 YTHDF2Q9Y5A9 579 aaKnown RBP7.53□□□□□ -1.2
MSH3-203ENST00000512531 MGAM2Q2M2H8 2515 aa7.53□□□□□ -1.2
MSH3-203ENST00000512531 IGHV2-70DA0A0C4DH43 119 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 ZNF320A2RRD8 509 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 NCBP2LA6PVI3 153 aaKnown RBP7.52□□□□□ -1.21
MSH3-203ENST00000512531 NPIPB5A8MRT5 1133 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 B4DSR2 109 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.21
MSH3-203ENST00000512531 MT-ND6P03923 174 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 OR10J4P0C629 311 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 TMEM11P17152 192 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 ORM2P19652 201 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 UBE2E1P51965 193 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 MFAP4P55083 255 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 C5orf64Q2M2E5 130 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 C10orf55Q5SWW7 151 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 SPATA31B1PQ5VZV4 182 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 TEX38Q6PEX7 206 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 ZNF562Q6V9R5 426 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 OR4F17Q8NGA8 305 aa7.52□□□□□ -1.21
MSH3-203ENST00000512531 CMTM2Q8TAZ6 248 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms