RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	PSENEN	Q9NZ42	101 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	TRAV14DV4	A0A0A6YYC5	116 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	FAM74A7	A6NL05	159 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	ZFP92	A6NM28	416 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	C1orf196	B1AJZ1	125 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM50A	O95807	157 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGLV1-51	P01701	117 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	CSN3	P07498	182 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	CTSG	P08311	255 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	NBEAP1	P0C6P0	100 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	IAPP	P10997	89 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	GP9	P14770	177 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	CBLN1	P23435	193 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	NPPC	P23582	126 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR10J1	P30954	320 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	RND2	P52198	227 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	MFAP2	P55001	183 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	YPEL3	P61236	119 aa	Predicted RBP	5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	ID3	Q02535	119 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	CD69	Q07108	199 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	FAM74A3	Q4VXF1	159 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	PVRIG	Q6DKI7	326 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	NRARP	Q7Z6K4	114 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM116	Q8NCL8	245 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR10P1	Q8NGE3	313 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	ACY3	Q96HD9	319 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	SMIM8	Q96KF7	97 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	METTL26	Q96S19	204 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	MARVELD1	Q9BSK0	173 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	NDUFAF3	Q9BU61	184 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	MAGT1	Q9H0U3	335 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	MGAT4C	Q9UBM8	478 aa		5.7	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGHV3-35	A0A0C4DH35	117 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR4C46	A6NHA9	309 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	SSSCA1	O60232	199 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	RD3L	P0DJH9	198 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	S100A10	P60903	97 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	SNRPE	P62304	92 aa	Known RBP	5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	HBG1	P69891	147 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	HBG2	P69892	147 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	AKR1C1	Q04828	323 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	RAB31	Q13636	194 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	GUK1	Q16774	197 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR52B4	Q8NGK2	314 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR4D5	Q8NGN0	318 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	NPIPB3	Q92617	1050 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	CHRDL1	Q9BU40	450 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	TUBA4B	Q9H853	241 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	SMAD5-AS1	Q9Y6J3	95 aa		5.69	□□□□□ -1.5
NR1I3-231	ENST00000512340	NBEAL2	Q6ZNJ1	2754 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	SMCO3	A2RU48	225 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	FNDC10	F2Z333	226 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGHV3-48	P01763	117 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	STAG3L2	P0CL84	134 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	CAV2	P51636	162 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	UBE2G2	P60604	165 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	RRAS2	P62070	204 aa	Predicted RBP	5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	DEFB114	Q30KQ6	69 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	LEMD1	Q68G75	181 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR8G2P	Q6IF36	304 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	PRSS54	Q6PEW0	395 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	UQCC3	Q6UW78	93 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	SVBP	Q8N300	66 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	BPIFC	Q8NFQ6	507 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	SMIM12	Q96EX1	92 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	SPAG8	Q99932	426 aa	Predicted RBP	5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	SLC25A31	Q9H0C2	315 aa		5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	LSM5	Q9Y4Y9	91 aa	Known RBP	5.68	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGHV7-4-1	A0A0J9YVY3	117 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM213	A2RRL7	107 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	HELT	A6NFD8	242 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	TEX46	H3BTG2	121 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340		M0R143	59 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	GOSR2	O14653	212 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	TOMM40	O96008	361 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	APOC3	P02656	99 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	MBP	P02686	304 aa	Predicted RBP	5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	PRB2	P02812	416 aa	Predicted RBP	5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGLC1	P0CG04	106 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	NHLRC4	P0CG21	123 aa	Predicted RBP	5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	C8orf88	P0DMB2	117 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	ADM	P35318	185 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	SELENOT	P62341	195 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	RPL11	P62913	178 aa	Known RBP	5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	DLK1	P80370	383 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	GAMT	Q14353	236 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	PSG3	Q16557	428 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	TIGIT	Q495A1	244 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	CD300E	Q496F6	205 aa	Predicted RBP	5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	SAMD13	Q5VXD3	122 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	BTNL8	Q6UX41	500 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	TOMM20L	Q6UXN7	152 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	IL34	Q6ZMJ4	242 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR51G1	Q8NGK1	321 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	ASB13	Q8WXK3	278 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	OR10C1	Q96KK4	312 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	PRR25	Q96S07	402 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	TRGV9	Q99603	122 aa		5.67	□□□□□ -1.5
NR1I3-231	ENST00000512340	RHPN1-AS1	Q9BWJ2	59 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms