RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 C9JQL5 133 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 LMX1BO60663 402 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 HLA-DRB1P01911 266 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF705DP0CH99 300 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF705BP0CI00 300 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 CCL1P22362 96 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 PFN2P35080 140 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 PPP1CCP36873 323 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 MYCNOSP40205 109 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 DSCR4P56555 118 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 TPPP2P59282 170 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 FOXF1Q12946 379 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 C12orf74Q32Q52 190 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 TSPO2Q5TGU0 170 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 C11orf87Q6NUJ2 197 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 TEX43Q6ZNM6 134 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 IL1F10Q8WWZ1 152 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 BET1LQ9NYM9 111 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 SHPKQ9UHJ6 478 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF443Q9Y2A4 671 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 PXMP4Q9Y6I8 212 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 EXPH5Q8NEV8 1989 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 DOPEY1Q5JWR5 2465 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 PHF3Q92576 2039 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 ASH1LQ9NR48 2969 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 UNC119BA6NIH7 251 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 FNDC10F2Z333 226 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 J3QQQ9 107 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 GEMIN2O14893 280 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 DPM2O94777 84 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 IFI6P09912 130 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 MED14OSP0DP75 135 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 CA6P23280 308 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 P2RX1P51575 399 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF141Q15928 474 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 UNQ5815/PRO19632Q6UWF5 114 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 CEACAM19Q7Z692 300 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 TEX29Q8N6K0 151 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 SMIM4Q8WVI0 70 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 MAP6D1Q9H9H5 199 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
TRAPPC11-208ENST00000511955 MYO7BQ6PIF6 2116 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 PCNX3Q9H6A9 2034 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 NBPF19A0A087WUL8 3843 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 CHD3Q12873 2000 aaKnown RBP3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 IGHV3-15A0A0B4J1V0 119 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 CPSF4LA6NMK7 179 aaKnown RBP3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 PAX4O43316 350 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 NDUFB6O95139 128 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF728P0DKX0 622 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 LPAR6P43657 344 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 BEAN1Q3B7T3 259 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 AADACL3Q5VUY0 350 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF429Q86V71 674 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 ODF3L1Q8IXM7 274 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 SUMF2Q8NBJ7 301 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR51T1Q8NGJ9 327 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR5D14Q8NGL3 314 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 Q8TCH9 128 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 FXYD5Q96DB9 178 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 ABCA12Q86UK0 2595 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 DSPPQ9NZW4 1301 aa3.97□□□□□ -1.77
TRAPPC11-208ENST00000511955 A0A1W2PQD3 144 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 A6NDN8 102 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 GGTLC3B5MD39 225 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 HLA-DPB1P04440 258 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 BCL2P10415 239 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 LMO1P25800 156 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 FKBP2P26885 142 aaKnown RBP3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 HNRNPA3P51991 378 aaKnown RBP3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 CRYBA2P53672 197 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF718Q3SXZ3 478 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 VAMP8Q9BV40 100 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM133Q9H2Q1 129 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 DOPEY2Q9Y3R5 2298 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 NOTCH2Q04721 2471 aa3.96□□□□□ -1.77
TRAPPC11-208ENST00000511955 GTF3C1Q12789 2109 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 IRGMA1A4Y4 181 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 GABARAPH6UMI1 98 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 PDCD6O75340 191 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 SNRPGP62308 76 aaKnown RBP3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF146Q15072 292 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 Q499Y3 187 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 ACP7Q6ZNF0 438 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 C1QL2Q7Z5L3 287 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 PRIMA1Q86XR5 153 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 C11orf53Q8IXP5 236 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 CNEP1R1Q8N9A8 125 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR4B1Q8NGF8 309 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAM57AQ8TBR7 257 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 STARD4Q96DR4 205 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 SSBP3Q9BWW4 388 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 BCL2L10Q9HD36 194 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 TAS2R8Q9NYW2 309 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAM215AQ9Y5M1 114 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 POLQO75417 2590 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms