RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PITX3O75364 302 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 MED6O75586 246 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 IGKV3-20P01619 116 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 ZNF705DP0CH99 300 aaPredicted RBP7.42□□□□□ -1.22
DDX41-211ENST00000510171 ZNF705BP0CI00 300 aaPredicted RBP7.42□□□□□ -1.22
DDX41-211ENST00000510171 PSG1P11464 419 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 HLA-DRB4P13762 266 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 VAMP1P23763 118 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 NKX2-1P43699 371 aaPredicted RBP7.42□□□□□ -1.22
DDX41-211ENST00000510171 RAB11AP62491 216 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 SPANXN2Q5MJ10 180 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 OR8G2PQ6IF36 304 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 SIGLEC15Q6ZMC9 328 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 CCDC190Q86UF4 302 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 RNF125Q96EQ8 232 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 SLC35E1Q96K37 410 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 NIPSNAP3BQ9BS92 247 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 PLA2G2EQ9NZK7 142 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 TMED3Q9Y3Q3 217 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 RFNGQ9Y644 331 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 HLA-DRB4X5D2U9 266 aa7.42□□□□□ -1.22
DDX41-211ENST00000510171 ZFP92A6NM28 416 aa7.41□□□□□ -1.22
DDX41-211ENST00000510171 HTN3P15516 51 aa7.41□□□□□ -1.22
DDX41-211ENST00000510171 FXYD7P58549 80 aa7.41□□□□□ -1.22
DDX41-211ENST00000510171 UBE2MP61081 183 aaKnown RBP7.41□□□□□ -1.22
DDX41-211ENST00000510171 RPP30P78346 268 aaKnown RBP7.41□□□□□ -1.22
DDX41-211ENST00000510171 GAMTQ14353 236 aa7.41□□□□□ -1.22
DDX41-211ENST00000510171 ZNF79Q15937 498 aa7.41□□□□□ -1.22
DDX41-211ENST00000510171 FAM222AQ5U5X8 452 aa7.41□□□□□ -1.22
DDX41-211ENST00000510171 CIB3Q96Q77 187 aaPredicted RBP7.41□□□□□ -1.22
DDX41-211ENST00000510171 SNRPGP15A8MWD9 76 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 SFT2D2O95562 160 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 PPP1R1AQ13522 171 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 GDF5OSQ5U4N7 250 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 LINC00052Q96N35 136 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 PBDC1Q9BVG4 233 aa7.4□□□□□ -1.22
DDX41-211ENST00000510171 RBM38Q9H0Z9 239 aaKnown RBP7.4□□□□□ -1.22
DDX41-211ENST00000510171 FAT2Q9NYQ8 4349 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 SYNGR2O43760 224 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 CFDP00746 253 aaPredicted RBP7.39□□□□□ -1.23
DDX41-211ENST00000510171 ID1P41134 155 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 INPP1P49441 399 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 FAM3BP58499 235 aaPredicted RBP7.39□□□□□ -1.23
DDX41-211ENST00000510171 ZNF90Q03938 601 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 OXA1LQ15070 435 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 OR4B1Q8NGF8 309 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 CLUHP3Q96NS8 147 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 TRGV9Q99603 122 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 SAV1Q9H4B6 383 aaPredicted RBP7.39□□□□□ -1.23
DDX41-211ENST00000510171 GOLT1BQ9Y3E0 138 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 DNAH2Q9P225 4427 aa7.39□□□□□ -1.23
DDX41-211ENST00000510171 IGKV1D-37A0A075B6S9 117 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 LOC102723971A0A1B0GUV8 181 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 NAP1L6A6NFF2 107 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 CDK2AP2O75956 126 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 HBE1P02100 147 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 IAPPP10997 89 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 DEFB1P60022 68 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 PSG9Q00887 426 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 GGNBP1Q5YKI7 109 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 TRIQKQ629K1 86 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 TMEM88Q6PEY1 159 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 FOXI2Q6ZQN5 318 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 THAP8Q8NA92 274 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 COQ8AQ8NI60 647 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 C7orf50Q9BRJ6 194 aaKnown RBP7.38□□□□□ -1.23
DDX41-211ENST00000510171 SRRQ9GZT4 340 aa7.38□□□□□ -1.23
DDX41-211ENST00000510171 PAIP2BQ9ULR5 123 aaKnown RBP7.38□□□□□ -1.23
DDX41-211ENST00000510171 YTHDF2Q9Y5A9 579 aaKnown RBP7.38□□□□□ -1.23
DDX41-211ENST00000510171 AGRNO00468 2067 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 NDUFB6O95139 128 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 HOXB5P09067 269 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 S100A7P31151 101 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 PSMB3P49720 205 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 LYZP61626 148 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 DAD1P61803 113 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 TNP2Q05952 138 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 EBLN2Q6P2I7 272 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 C1orf158Q8N1D5 194 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 ZNF709Q8N972 641 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 PPP1R14BQ96C90 147 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 ATG101Q9BSB4 218 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 WDR12Q9GZL7 423 aaKnown RBP7.37□□□□□ -1.23
DDX41-211ENST00000510171 MAGT1Q9H0U3 335 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 SLC35B3Q9H1N7 401 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 SLC45A2Q9UMX9 530 aa7.37□□□□□ -1.23
DDX41-211ENST00000510171 IGKV1OR2-108A0A075B7D4 117 aa7.36□□□□□ -1.23
DDX41-211ENST00000510171 C9orf170A2RU37 121 aa7.36□□□□□ -1.23
DDX41-211ENST00000510171 CENPXA8MT69 81 aa7.36□□□□□ -1.23
DDX41-211ENST00000510171 PRSS46E5RG02 174 aa7.36□□□□□ -1.23
DDX41-211ENST00000510171 WRBO00258 174 aa7.36□□□□□ -1.23
DDX41-211ENST00000510171 ISLRO14498 428 aa7.36□□□□□ -1.23
DDX41-211ENST00000510171 MEOX2P50222 304 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms