RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 FXYD7P58549 80 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 GGNBP1Q5YKI7 109 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 ZNF705AQ6ZN79 300 aaPredicted RBP8.98□□□□□ -0.97
PDPN-208ENST00000509009 FOXI2Q6ZQN5 318 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 ZNF767PQ75MW2 155 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 OR8I2Q8N0Y5 310 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 CIB3Q96Q77 187 aaPredicted RBP8.98□□□□□ -0.97
PDPN-208ENST00000509009 NEU1Q99519 415 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 RNF126Q9BV68 326 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 DNAH6Q9C0G6 4158 aa8.98□□□□□ -0.97
PDPN-208ENST00000509009 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 SMIM9A6NGZ8 99 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 ZNF705FA8MVS1 300 aaPredicted RBP8.97□□□□□ -0.97
PDPN-208ENST00000509009 WRBO00258 174 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 CFDP00746 253 aaPredicted RBP8.97□□□□□ -0.97
PDPN-208ENST00000509009 ZNF705DP0CH99 300 aaPredicted RBP8.97□□□□□ -0.97
PDPN-208ENST00000509009 ZNF705BP0CI00 300 aaPredicted RBP8.97□□□□□ -0.97
PDPN-208ENST00000509009 S100A5P33763 92 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 PSMB3P49720 205 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 RPP30P78346 268 aaKnown RBP8.97□□□□□ -0.97
PDPN-208ENST00000509009 PPP1R14BQ96C90 147 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 C17orf77Q96MU5 243 aa8.97□□□□□ -0.97
PDPN-208ENST00000509009 CCDC160A6NGH7 325 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 ISLRO14498 428 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 ID3Q02535 119 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 SPANXN5Q5MJ07 72 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 SPATA31B1PQ5VZV4 182 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 TMEM182Q6ZP80 229 aaPredicted RBP8.96□□□□□ -0.98
PDPN-208ENST00000509009 ZNF709Q8N972 641 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 OR4B1Q8NGF8 309 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 COQ8AQ8NI60 647 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 RSG1Q9BU20 258 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 SCRT1Q9BWW7 348 aa8.96□□□□□ -0.98
PDPN-208ENST00000509009 C9orf170A2RU37 121 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 ZNF98A6NK75 572 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 F6UB75 175 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 GATA2P23769 480 aaPredicted RBP8.95□□□□□ -0.98
PDPN-208ENST00000509009 PAX9P55771 341 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 UBE2MP61081 183 aaKnown RBP8.95□□□□□ -0.98
PDPN-208ENST00000509009 PSG9Q00887 426 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 FAM78BQ5VT40 261 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 EBLN2Q6P2I7 272 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 RBM38Q9H0Z9 239 aaKnown RBP8.95□□□□□ -0.98
PDPN-208ENST00000509009 SLC45A2Q9UMX9 530 aa8.95□□□□□ -0.98
PDPN-208ENST00000509009 STRAPQ9Y3F4 350 aaKnown RBP8.95□□□□□ -0.98
PDPN-208ENST00000509009 IGHV3OR16-12A0A075B7B8 117 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 A0A0J9YX75 114 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 TMEM189A5PLL7 270 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 ADAP1O75689 374 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 ORM2P19652 201 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 GALR1P47211 349 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 EMP1P54849 157 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 BAK1Q16611 211 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 TMEM144Q7Z5S9 345 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 BPIFCQ8NFQ6 507 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 C16orf92Q96LL3 132 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 SRRQ9GZT4 340 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 SLC35B3Q9H1N7 401 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 SLC25A32Q9H2D1 315 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 RPRMQ9NS64 109 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 FLVCR2Q9UPI3 526 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 RFNGQ9Y644 331 aa8.94□□□□□ -0.98
PDPN-208ENST00000509009 H3BP45 60 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 NDUFB6O95139 128 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 AMBPP02760 352 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 MEOX2P50222 304 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 POLR2GP62487 172 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDPN-208ENST00000509009 SPANXN2Q5MJ10 180 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 SAMD13Q5VXD3 122 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 OR4D5Q8NGN0 318 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 SLC25A22Q9H936 323 aa8.93□□□□□ -0.98
PDPN-208ENST00000509009 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 NAP1L6A6NFF2 107 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 PMS2P5A8MQ11 134 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 A8MTW9 85 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 ZNF701M0R085 212 aaPredicted RBP8.92□□□□□ -0.98
PDPN-208ENST00000509009 AKR1C1Q04828 323 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 AMTNQ6UX39 209 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 ACOT7LQ6ZUV0 252 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 POM121L12Q8N7R1 296 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 OR1B1Q8NGR6 318 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 SMIM8Q96KF7 97 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 NDUFAF3Q9BU61 184 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 TMEM147Q9BVK8 224 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 PSENENQ9NZ42 101 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 DOK5Q9P104 306 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 DKK2Q9UBU2 259 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 GOLT1BQ9Y3E0 138 aa8.92□□□□□ -0.98
PDPN-208ENST00000509009 TRAV8-2A0A0B4J237 113 aa8.91□□□□□ -0.98
PDPN-208ENST00000509009 OR4E1P0C645 316 aa8.91□□□□□ -0.98
PDPN-208ENST00000509009 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
PDPN-208ENST00000509009 IGFL4Q6B9Z1 124 aa8.91□□□□□ -0.98
PDPN-208ENST00000509009 CYP2G1PQ6ZSU1 146 aa8.91□□□□□ -0.98
PDPN-208ENST00000509009 GPR82Q96P67 336 aa8.91□□□□□ -0.98
PDPN-208ENST00000509009 SDHCQ99643 169 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms