RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ETFRF1Q6IPR1 90 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 LGI3Q8N145 548 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 POM121L12Q8N7R1 296 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 DTD1Q8TEA8 209 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 RNF125Q96EQ8 232 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 DIRAS2Q96HU8 199 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 CLUHP3Q96NS8 147 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 NEU1Q99519 415 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 PRRT1Q99946 306 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 SLC35B3Q9H1N7 401 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 SAV1Q9H4B6 383 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 SHPKQ9UHJ6 478 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 U3KQ87 197 aa4.58□□□□□ -1.68
HMGN1P16-201ENST00000508308 A8MTW9 85 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 PRSS46E5RG02 174 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 SCGB2A1O75556 95 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 AKR1C4P17516 323 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 TNFSF8P32971 234 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 GPX4P36969 197 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 CCR6P51684 374 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 NUTF2P61970 127 aaKnown RBP4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 OR2F1Q13607 317 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 IL18Q14116 193 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 SMCO1Q147U7 214 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 OR8G2PQ6IF36 304 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 AMTNQ6UX39 209 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 TMEM182Q6ZP80 229 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 FOXI2Q6ZQN5 318 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 Q6ZR54 194 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 LINC00336Q6ZUF6 198 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 GPR141Q7Z602 305 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 C1orf158Q8N1D5 194 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 C20orf173Q96LM9 149 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 PBDC1Q9BVG4 233 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 C1QTNF4Q9BXJ3 329 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 SLIRPQ9GZT3 109 aaKnown RBP4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 CCDC59Q9P031 241 aaKnown RBP4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 DKK2Q9UBU2 259 aa4.57□□□□□ -1.68
HMGN1P16-201ENST00000508308 A0A0J9YX75 114 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 ZFP92A6NM28 416 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 M0R2N4 97 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 PRM2P04554 102 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 SPART-AS1P0CW21 52 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 P0DMU3 169 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 FAM231AP0DMU4 169 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 FAM231CP0DMU5 169 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 PSMB3P49720 205 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 EMP1P54849 157 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 PAX9P55771 341 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 ATP5IP56385 69 aaPredicted RBP4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 C1orf194Q5T5A4 169 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 FAM78BQ5VT40 261 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 NOXA1Q86UR1 476 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 THAP8Q8NA92 274 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 TRIM63Q969Q1 353 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 LINC00052Q96N35 136 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 NDUFAF3Q9BU61 184 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 MRPS26Q9BYN8 205 aaKnown RBP4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 KCNIP3Q9Y2W7 256 aa4.56□□□□□ -1.68
HMGN1P16-201ENST00000508308 IGHV3OR16-12A0A075B7B8 117 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 TRAV8-2A0A0B4J237 113 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 SMIM9A6NGZ8 99 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 PRSS29PA6NIE9 313 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 H3BMQ9 156 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 ISLRO14498 428 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 CRXO43186 299 aaPredicted RBP4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 IAPPP10997 89 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 GATA2P23769 480 aaPredicted RBP4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 TMBIM6P55061 237 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 LYZP61626 148 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 LGALS9BQ3B8N2 356 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 FAM222AQ5U5X8 452 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 LRTM2Q8N967 370 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 OR4B1Q8NGF8 309 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 OR1S1Q8NH92 325 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 RAB2BQ8WUD1 216 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 TRGV9Q99603 122 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 MAGT1Q9H0U3 335 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 SLC25A32Q9H2D1 315 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 MCUBQ9NWR8 336 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 RABL2AQ9UBK7 228 aaPredicted RBP4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 CACFD1Q9UGQ2 172 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 RSL24D1Q9UHA3 163 aaKnown RBP4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 SCP2D1Q9UJQ7 156 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 RABL2BQ9UNT1 228 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 RFNGQ9Y644 331 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 V9GYH0 126 aa4.55□□□□□ -1.68
HMGN1P16-201ENST00000508308 IGLV2-18A0A075B6J9 118 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 PLAC8L1A1L4L8 177 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 FABP12A6NFH5 140 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 ZNF98A6NK75 572 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 SNRPGP15A8MWD9 76 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 SLC25A6P12236 298 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 NUP62P37198 522 aaPredicted RBP4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 ID1P41134 155 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 SRPXP78539 464 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 PSG9Q00887 426 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 OXA1LQ15070 435 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms