RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 FOXH1O75593 365 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 ATP5LO75964 103 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 ADCYAP1P18509 176 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 RPL8P62917 257 aaKnown RBP5.63□□□□□ -1.51
CLCN3-206ENST00000507875 SMAGPQ0VAQ4 97 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 C10orf91Q5T1B1 145 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 TGIF2LYQ8IUE0 185 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 C11orf42Q8N5U0 333 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 ZNF439Q8NDP4 499 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 SLC25A31Q9H0C2 315 aa5.63□□□□□ -1.51
CLCN3-206ENST00000507875 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 A0A1B0GU03 582 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 A0A1W2PRD5 423 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 MAP1LC3B2A6NCE7 125 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 GGCTO75223 188 aaKnown RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 PITX3O75364 302 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 IGHV2-5P01817 119 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 IGHV4-39P01824 125 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 ZNF137PP52743 207 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 BAXQ07812 192 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 EIF4EBP1Q13541 118 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 Q6ZRG5 221 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 SLC25A48Q6ZT89 311 aaKnown RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 TCF23Q7RTU1 214 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 SVBPQ8N300 66 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 TMEM252Q8N6L7 170 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 UBALD1Q8TB05 177 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 C10orf105Q8TEF2 133 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 TCTEX1D2Q8WW35 142 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 H1FXQ92522 213 aaKnown RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 NKX6-2Q9C056 277 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 MAP1LC3BQ9GZQ8 125 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 MS4A6AQ9H2W1 248 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 UQCC1Q9NVA1 299 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 AMMECR1Q9Y4X0 333 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 DOCK11Q5JSL3 2073 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 IGHV4-28A0A0C4DH34 117 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 A0A0G2JRQ6 117 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 PPP5D1E7EU14 171 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 CORTO00230 105 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 APOHP02749 345 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 FAM106CPP0CH98 169 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 THBS3P49746 956 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 RAB5CP51148 216 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 ZNF266Q14584 549 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 ZNF343Q6P1L6 599 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 DRAM1Q8N682 238 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 OR9G1Q8NH87 305 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 PHLDA1Q8WV24 401 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 LSM10Q969L4 123 aaKnown RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 GPR146Q96CH1 333 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 AGMATQ9BSE5 352 aa5.62□□□□□ -1.51
CLCN3-206ENST00000507875 METTL1Q9UBP6 276 aaKnown RBP5.62□□□□□ -1.51
CLCN3-206ENST00000507875 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 ANKRD17O75179 2603 aaKnown RBP5.61□□□□□ -1.51
CLCN3-206ENST00000507875 INAFM1C9JVW0 142 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 IGKV1-39P01597 117 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 TFF1P04155 84 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 IGKV1D-39P04432 117 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 FABP9Q0Z7S8 132 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 SPATA31B1PQ5VZV4 182 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 C9orf139Q6ZV77 190 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 LINC01551Q86U37 167 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 OR8I2Q8N0Y5 310 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 TPRX1Q8N7U7 411 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 SEC11CQ9BY50 192 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 PARP12Q9H0J9 701 aaKnown RBP5.61□□□□□ -1.51
CLCN3-206ENST00000507875 SH3BGRL3Q9H299 93 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 TMEM133Q9H2Q1 129 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 HSPB8Q9UJY1 196 aa5.61□□□□□ -1.51
CLCN3-206ENST00000507875 CARHSP1Q9Y2V2 147 aaKnown RBP5.61□□□□□ -1.51
CLCN3-206ENST00000507875 LYNX1G3V0Z9 82 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 IGHV1-8P0DP01 117 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 LYNX1P0DP58 116 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 CD99P14209 185 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 PPP1CCP36873 323 aaKnown RBP5.6□□□□□ -1.51
CLCN3-206ENST00000507875 RPL13AP40429 203 aaKnown RBP5.6□□□□□ -1.51
CLCN3-206ENST00000507875 GUCA2BQ16661 112 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 DEFB113Q30KQ7 82 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 AVPI1Q5T686 147 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR4F17Q8NGA8 305 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR5C1Q8NGR4 320 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR4F5Q8NH21 305 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR4F4Q96R69 305 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 RASL11BQ9BPW5 248 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR2D2Q9H210 308 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 SIGLEC9Q9Y336 463 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR4C46A6NHA9 309 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OOSP1A8MZH6 123 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 AGPAT2O15120 278 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 CST7O76096 145 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 IGKV1-5P01602 117 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 FGF7P21781 194 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 DVL1P1P54792 670 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-206ENST00000507875 ADAMTSL5Q6ZMM2 481 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 ZNF833PQ6ZTB9 187 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 NIT1Q86X76 327 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 OR1N2Q8NGR9 330 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 RASL10AQ92737 203 aa5.6□□□□□ -1.51
CLCN3-206ENST00000507875 CLEC7AQ9BXN2 247 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms