RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ORM2P19652 201 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 VAMP2P63027 116 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 ACTL10Q5JWF8 245 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 TMEM182Q6ZP80 229 aaPredicted RBP11.4□□□□□ -0.58
MED28-204ENST00000506409 TRPT1Q86TN4 253 aaKnown RBP11.4□□□□□ -0.58
MED28-204ENST00000506409 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 GATAD1Q8WUU5 269 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 SEPSECSQ9HD40 501 aaKnown RBP11.4□□□□□ -0.58
MED28-204ENST00000506409 MGAT4CQ9UBM8 478 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 LSM5Q9Y4Y9 91 aaKnown RBP11.4□□□□□ -0.58
MED28-204ENST00000506409 FNDC10F2Z333 226 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 K7EPK0 472 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 IL5P05113 134 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 IFITM3Q01628 133 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 GSG1LQ6UXU4 331 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 CYP2G1PQ6ZSU1 146 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 OR1B1Q8NGR6 318 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 C2orf50Q96LR7 162 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
MED28-204ENST00000506409 SPP1P10451 314 aa11.38□□□□□ -0.59
MED28-204ENST00000506409 S100A7P31151 101 aa11.38□□□□□ -0.59
MED28-204ENST00000506409 RARRES2Q99969 163 aa11.38□□□□□ -0.59
MED28-204ENST00000506409 SLC25A22Q9H936 323 aa11.38□□□□□ -0.59
MED28-204ENST00000506409 GPN1Q9HCN4 374 aaPredicted RBP11.38□□□□□ -0.59
MED28-204ENST00000506409 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
MED28-204ENST00000506409 AGRNO00468 2067 aa11.38□□□□□ -0.59
MED28-204ENST00000506409 ZNF98A6NK75 572 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 PVALBP20472 110 aaPredicted RBP11.37□□□□□ -0.59
MED28-204ENST00000506409 ID1P41134 155 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 BCAP31P51572 246 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 CAV2P51636 162 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 S100A10P60903 97 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 SELENOTP62341 195 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 ARL16Q0P5N6 197 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 MORN3Q6PF18 240 aaPredicted RBP11.37□□□□□ -0.59
MED28-204ENST00000506409 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 NRARPQ7Z6K4 114 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 TMEM217Q8N7C4 229 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 OR11H2Q8NH07 326 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 DOK5Q9P104 306 aa11.37□□□□□ -0.59
MED28-204ENST00000506409 LINC00869P0C866 280 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 GALR1P47211 349 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 PSMB3P49720 205 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 RAP2BP61225 183 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 EWSR1Q01844 656 aaKnown RBP eCLIP11.36□□□□□ -0.59
MED28-204ENST00000506409 SLC38A11Q08AI6 406 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 SLC25A32Q9H2D1 315 aa11.36□□□□□ -0.59
MED28-204ENST00000506409 SOCS3O14543 225 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 HYPMO75409 117 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 DEDDO75618 318 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 GIG44P09565 113 aaPredicted RBP11.35□□□□□ -0.59
MED28-204ENST00000506409 ATF4P18848 351 aaPredicted RBP11.35□□□□□ -0.59
MED28-204ENST00000506409 C4BPBP20851 252 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 MEOX2P50222 304 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 DEFA1P59665 94 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 DEFA3P59666 94 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 RAB32Q13637 225 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 GPR82Q96P67 336 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 C11orf1Q9H5F2 150 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 HIGD1AQ9Y241 93 aa11.35□□□□□ -0.59
MED28-204ENST00000506409 CSMD3Q7Z407 3707 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 FAM24AA6NFZ4 105 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 INMT-MINDY4F8WBC2 141 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 H3BMM0 161 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 H3BRN7 92 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 ISLRO14498 428 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 PRAF2O60831 178 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 CST7O76096 145 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 OR5G3P0C626 314 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 PLP1P60201 277 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 IL15RAQ13261 267 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 ZNF546Q86UE3 836 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 RSG1Q9BU20 258 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 SCRT1Q9BWW7 348 aa11.34□□□□□ -0.59
MED28-204ENST00000506409 SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
MED28-204ENST00000506409 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 GOSR2O14653 212 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 AGPAT2O15120 278 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 HLA-DRB4P13762 266 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 NUTF2P61970 127 aaKnown RBP11.33□□□□□ -0.6
MED28-204ENST00000506409 S100A7AQ86SG5 101 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 ARL6Q9H0F7 186 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
MED28-204ENST00000506409 HLA-DRB4X5D2U9 266 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 STARD9Q9P2P6 4700 aa11.33□□□□□ -0.6
MED28-204ENST00000506409 LCE6AA0A183 80 aa11.32□□□□□ -0.6
MED28-204ENST00000506409 DEFB1P60022 68 aa11.32□□□□□ -0.6
MED28-204ENST00000506409 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
MED28-204ENST00000506409 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
MED28-204ENST00000506409 MARVELD1Q9BSK0 173 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms