RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 NUPR1O60356 82 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 VENTXO95231 258 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 RPL29P47914 159 aaKnown RBP4.54□□□□□ -1.68
SCLT1-207ENST00000506233 THBS3P49746 956 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 XGP55808 180 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 FOXE3Q13461 319 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 MIR17HGQ75NE6 70 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 LPAR2Q9HBW0 351 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 CBLN4Q9NTU7 201 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 TMEM242Q9NWH2 141 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 PKDREJQ9NTG1 2253 aa4.54□□□□□ -1.68
SCLT1-207ENST00000506233 PKD1L1Q8TDX9 2849 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 IGKV1-17P01599 117 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 CDC34P49427 236 aaPredicted RBP4.53□□□□□ -1.68
SCLT1-207ENST00000506233 KIAA0141Q14154 515 aaPredicted RBP4.53□□□□□ -1.68
SCLT1-207ENST00000506233 KHDC3LQ587J8 217 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 NEK7Q8TDX7 302 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 CBY1Q9Y3M2 126 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 A0A1B0GV50 99 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 RD3LP0DJH9 198 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 GFI1BQ5VTD9 330 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 OR8G2PQ6IF36 304 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 SMDT1Q9H4I9 107 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 TRGV10A0A0A0MS01 117 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 CD24P25063 80 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 LCN2P80188 198 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 RBMS3Q6XE24 437 aaKnown RBP4.53□□□□□ -1.68
SCLT1-207ENST00000506233 SPNS3Q6ZMD2 512 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 GPHB5Q86YW7 130 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 LINC00518Q8N0U6 118 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 Q8N9W7 124 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 TVP23CQ96ET8 276 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 TMEM147Q9BVK8 224 aa4.53□□□□□ -1.68
SCLT1-207ENST00000506233 MRPL27Q9P0M9 148 aaKnown RBP4.53□□□□□ -1.68
SCLT1-207ENST00000506233 ZNF462Q96JM2 2506 aa4.53□□□□□ -1.69
SCLT1-207ENST00000506233 TRBV9A0A0B4J1U6 114 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV3-72A0A0B4J1Y9 119 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV3-48P01763 117 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 PAX8Q06710 450 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 TMEM30BQ3MIR4 351 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 PDPNQ86YL7 162 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 URB1-AS1Q96HZ7 61 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 LINC00479Q96M42 142 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SLC25A31Q9H0C2 315 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 OR51M1Q9H341 326 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 COL7A1Q02388 2944 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 ZFYVE26Q68DK2 2539 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 A0A1B0GW15 77 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SMCO3A2RU48 225 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 F8W036 122 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 REG1AP05451 166 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 PDLIM4P50479 330 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 RAB7AP51149 207 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 UCNP55089 124 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 BLOC1S1P78537 153 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 TPTE2P1Q5T6R2 138 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 PHLDA1Q8WV24 401 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-207ENST00000506233 GNPNAT1Q96EK6 184 aaPredicted RBP4.52□□□□□ -1.69
SCLT1-207ENST00000506233 OVOL2Q9BRP0 275 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 NRN1Q9NPD7 142 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 IGLV11-55A0A075B6I3 123 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 CENPVL3A0A0U1RRI6 287 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 WI2-2373I1.2A0A1W2PRP0 233 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SNAI2O43623 268 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 IGLC1P0CG04 106 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 ARL14EPLP0DKL9 152 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 CRIP1P50238 77 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 RNF212Q495C1 297 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SVBPQ8N300 66 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 Q8N976 141 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 OR4S2Q8NH73 311 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SPIN2AQ99865 258 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SPIN2BQ9BPZ2 258 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 SLC25A33Q9BSK2 321 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 PARLQ9H300 379 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 GLS2Q9UI32 602 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 ROS1P08922 2347 aa4.52□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV7-81A0A0B4J1V7 117 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 SCO2A0A1W2PP80 73 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 CRIP2P52943 208 aaPredicted RBP4.51□□□□□ -1.69
SCLT1-207ENST00000506233 VMO1Q7Z5L0 202 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 SLC35E3Q7Z769 313 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 KIR3DL3Q8N743 410 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 OR4A5Q8NH83 315 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 V9GYV3 84 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 hADV38S2A0JD32 116 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BKO60814 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BJP06899 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 FGF7P21781 194 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BOP23527 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BBP33778 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 ELLP55199 621 aaPredicted RBP4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BDP58876 126 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms