RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 UBR2Q8IWV8 1755 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRBV19A0A075B6N1 114 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 A8MWV9 139 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 CCL25O15444 150 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 CCL16O15467 120 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 NDUFB3O43676 98 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 NUPR1O60356 82 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFNA7P01567 189 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 PIGPP57054 158 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 LSM6P62312 80 aaKnown RBP0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 RRN3P1Q2M238 152 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 TEN1Q86WV5 123 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 Q8N6K4 173 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR11H6Q8NGC7 330 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR5D14Q8NGL3 314 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 SIGMAR1Q99720 223 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 SLC25A21Q9BQT8 299 aaPredicted RBP0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 RNASE7Q9H1E1 156 aaKnown RBP0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 TNFSF18Q9UNG2 199 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARL2BPQ9Y2Y0 163 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 LY96Q9Y6Y9 160 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 HECW1Q76N89 1606 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 KIF1BO60333 1816 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 MYO18AQ92614 2054 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRAV4A0A0B4J268 109 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 IGHV1-58A0A0C4DH39 117 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 TLCD2A6NGC4 264 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR2T8A6NH00 312 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 C17orf112F2Z3M2 114 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 H3BRM9 83 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 IGLV3-1P01715 115 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 RNASE4P34096 147 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 EFNA4P52798 201 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 UBE2BP63146 152 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 HAGHLQ6PII5 290 aaPredicted RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 SPATA8Q6RVD6 105 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 LINC00575Q6W349 94 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 SBSPONQ8IVN8 264 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 PDZD9Q8IXQ8 264 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10K1Q8NGX5 313 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 LINC00052Q96N35 136 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 UCK1Q9HA47 277 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 ENY2Q9NPA8 101 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 TAS2R7Q9NYW3 318 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 PCTPQ9UKL6 214 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 FAM32AQ9Y421 112 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 CCDC144AA2RUR9 1427 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 HEATR1Q9H583 2144 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 MYLKQ15746 1914 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SIP14410 1827 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARHGEF11O15085 1522 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRAV10A0A0B4J240 114 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 FAM159BA6NKW6 160 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 E7EUB6 86 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 F8W1H4 67 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 HMGB3O15347 200 aaKnown RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 CST8O60676 142 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ERC2-IT1O76042 136 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SERPINA1P01009 418 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10J4P0C629 311 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 COX7CP15954 63 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SRIP30626 198 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ATP5G3P48201 142 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 DSCR4P56555 118 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 DEFA3P59666 94 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 CDK6Q00534 326 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 REEP5Q00765 189 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 FADDQ13158 208 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMED2Q15363 201 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SPRNQ5BIV9 151 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 EIF5AL1Q6IS14 154 aaKnown RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ZNF833PQ6ZTB9 187 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 GOLT1AQ6ZVE7 132 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFT20Q8IY31 132 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 Q8IYB0 196 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10X1Q8NGY0 326 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10AC1Q8NH08 325 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 PSMF1Q92530 271 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 MUCL1Q96DR8 90 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TEX37Q96LM6 180 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 PRAP1Q96NZ9 151 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 PBOV1Q9GZY1 135 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMEM126AQ9H061 195 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMEM138Q9NPI0 162 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 MED29Q9NX70 200 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OPTCQ9UBM4 332 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR52A1Q9UKL2 312 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 CHCHD2Q9Y6H1 151 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 COL1A1P02452 1464 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 ZFYVE9O95405 1425 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 ASCC3Q8N3C0 2202 aaKnown RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 M0R233 179 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 AIPO00170 330 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 TAX1BP3O14907 124 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 E2F6O75461 281 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 KLF7O75840 302 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 NDUFC2O95298 119 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 CD2P06729 351 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 CST2P09228 141 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 CXCL8P10145 99 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms