RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 UBR2Q8IWV8 1755 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRBV19A0A075B6N1 114 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 A8MWV9 139 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 CCL25O15444 150 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 CCL16O15467 120 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 NDUFB3O43676 98 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 NUPR1O60356 82 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFNA7P01567 189 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 PIGPP57054 158 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 LSM6P62312 80 aaKnown RBP0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 RRN3P1Q2M238 152 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 TEN1Q86WV5 123 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 Q8N6K4 173 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR11H6Q8NGC7 330 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR5D14Q8NGL3 314 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 SIGMAR1Q99720 223 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 SLC25A21Q9BQT8 299 aaPredicted RBP0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 RNASE7Q9H1E1 156 aaKnown RBP0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 TNFSF18Q9UNG2 199 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARL2BPQ9Y2Y0 163 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 LY96Q9Y6Y9 160 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 HECW1Q76N89 1606 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 KIF1BO60333 1816 aa0.27□□□□□ -2.37
HMGB1P29-201ENST00000505659 MYO18AQ92614 2054 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRAV4A0A0B4J268 109 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 IGHV1-58A0A0C4DH39 117 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 TLCD2A6NGC4 264 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR2T8A6NH00 312 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 C17orf112F2Z3M2 114 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 H3BRM9 83 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 IGLV3-1P01715 115 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 RNASE4P34096 147 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 EFNA4P52798 201 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 UBE2BP63146 152 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 HAGHLQ6PII5 290 aaPredicted RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 SPATA8Q6RVD6 105 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 LINC00575Q6W349 94 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 SBSPONQ8IVN8 264 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 PDZD9Q8IXQ8 264 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10K1Q8NGX5 313 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 LINC00052Q96N35 136 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 UCK1Q9HA47 277 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 ENY2Q9NPA8 101 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 TAS2R7Q9NYW3 318 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 PCTPQ9UKL6 214 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 FAM32AQ9Y421 112 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 CCDC144AA2RUR9 1427 aa0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 HEATR1Q9H583 2144 aaKnown RBP0.26□□□□□ -2.37
HMGB1P29-201ENST00000505659 MYLKQ15746 1914 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SIP14410 1827 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARHGEF11O15085 1522 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRAV10A0A0B4J240 114 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 FAM159BA6NKW6 160 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 E7EUB6 86 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 F8W1H4 67 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 HMGB3O15347 200 aaKnown RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 CST8O60676 142 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ERC2-IT1O76042 136 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SERPINA1P01009 418 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10J4P0C629 311 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 COX7CP15954 63 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SRIP30626 198 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ATP5G3P48201 142 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 DSCR4P56555 118 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 DEFA3P59666 94 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 CDK6Q00534 326 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 REEP5Q00765 189 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 FADDQ13158 208 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMED2Q15363 201 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 SPRNQ5BIV9 151 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 EIF5AL1Q6IS14 154 aaKnown RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 ZNF833PQ6ZTB9 187 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 GOLT1AQ6ZVE7 132 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFT20Q8IY31 132 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 Q8IYB0 196 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10X1Q8NGY0 326 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10AC1Q8NH08 325 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 PSMF1Q92530 271 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 MUCL1Q96DR8 90 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TEX37Q96LM6 180 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 PRAP1Q96NZ9 151 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 PBOV1Q9GZY1 135 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMEM126AQ9H061 195 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMEM138Q9NPI0 162 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 MED29Q9NX70 200 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OPTCQ9UBM4 332 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR52A1Q9UKL2 312 aa0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 CHCHD2Q9Y6H1 151 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P29-201ENST00000505659 COL1A1P02452 1464 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 ZFYVE9O95405 1425 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 ASCC3Q8N3C0 2202 aaKnown RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 M0R233 179 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 AIPO00170 330 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 TAX1BP3O14907 124 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 E2F6O75461 281 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 KLF7O75840 302 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 NDUFC2O95298 119 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 CD2P06729 351 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 CST2P09228 141 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 CXCL8P10145 99 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms