RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 DEFB131BA0A096LNP1 70 aa14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 AMBPP02760 352 aa14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 IAPPP10997 89 aa14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 MEOX2P50222 304 aa14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 PAIP2BQ9ULR5 123 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 CELA1Q9UNI1 258 aa14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 DNAH10Q8IVF4 4471 aa14.36□□□□□ -0.11
UBE2D3-220ENST00000505307 ZNF705FA8MVS1 300 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 SOCS3O14543 225 aa14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 SYNGR2O43760 224 aa14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 SFT2D2O95562 160 aa14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 ZNF705DP0CH99 300 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 ZNF705BP0CI00 300 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 OR2F1Q13607 317 aa14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 V9GYH0 126 aa14.35□□□□□ -0.11
UBE2D3-220ENST00000505307 TEX48A0A1B0GUV7 120 aa14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 SPART-AS1P0CW21 52 aa14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 GALR1P47211 349 aa14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 PAX9P55771 341 aa14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 UBE2MP61081 183 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 GDF5OSQ5U4N7 250 aa14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 EBLN2Q6P2I7 272 aa14.34□□□□□ -0.11
UBE2D3-220ENST00000505307 IGKV1OR2-108A0A075B7D4 117 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 PPP1R1AQ13522 171 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 ZNF79Q15937 498 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 OR4B1Q8NGF8 309 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 NDUFAF3Q9BU61 184 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 RPRMQ9NS64 109 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 RFNGQ9Y644 331 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 VPS13DQ5THJ4 4388 aa14.33□□□□□ -0.12
UBE2D3-220ENST00000505307 WRBO00258 174 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 IGKV3-20P01619 116 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 P0DMU3 169 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 FAM231AP0DMU4 169 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 FAM231CP0DMU5 169 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 PSG9Q00887 426 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 ZNF709Q8N972 641 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 BPIFCQ8NFQ6 507 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 OR4D5Q8NGN0 318 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 GPR82Q96P67 336 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 GOLT1BQ9Y3E0 138 aa14.32□□□□□ -0.12
UBE2D3-220ENST00000505307 PRSS46E5RG02 174 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 HOXB5P09067 269 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 ZNF767PQ75MW2 155 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 CCDC190Q86UF4 302 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 FAM210BQ96KR6 192 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 C16orf92Q96LL3 132 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 MAGT1Q9H0U3 335 aa14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 STRAPQ9Y3F4 350 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-220ENST00000505307 A0A0J9YX75 114 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 CCDC160A6NGH7 325 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 FXYD7P58549 80 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 DEFB1P60022 68 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 SPANXN5Q5MJ07 72 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 FAM78BQ5VT40 261 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 OR1B1Q8NGR6 318 aa14.3□□□□□ -0.12
UBE2D3-220ENST00000505307 IGHV3OR16-12A0A075B7B8 117 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 AKR1C1Q04828 323 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 SPANXN2Q5MJ10 180 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 LINC00336Q6ZUF6 198 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 POM121L12Q8N7R1 296 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 RSG1Q9BU20 258 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 TMEM147Q9BVK8 224 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 SLC25A32Q9H2D1 315 aa14.29□□□□□ -0.12
UBE2D3-220ENST00000505307 NAP1L6A6NFF2 107 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 HBE1P02100 147 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 ORM2P19652 201 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 EMP1P54849 157 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 ID3Q02535 119 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 TMEM144Q7Z5S9 345 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 SLC35B3Q9H1N7 401 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 SLC25A22Q9H936 323 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 DOK5Q9P104 306 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 DKK2Q9UBU2 259 aa14.28□□□□□ -0.12
UBE2D3-220ENST00000505307 A8MTW9 85 aa14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 INPP1P49441 399 aa14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 OXA1LQ15070 435 aa14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 S100A7AQ86SG5 101 aa14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 C7orf50Q9BRJ6 194 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 NIPSNAP3BQ9BS92 247 aa14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 KRTAP17-1Q9BYP8 105 aa14.27□□□□□ -0.13
UBE2D3-220ENST00000505307 C9orf170A2RU37 121 aa14.26□□□□□ -0.13
UBE2D3-220ENST00000505307 F6UB75 175 aa14.26□□□□□ -0.13
UBE2D3-220ENST00000505307 DUSP14O95147 198 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-220ENST00000505307 IFNA21P01568 189 aa14.26□□□□□ -0.13
UBE2D3-220ENST00000505307 ACOT7LQ6ZUV0 252 aa14.26□□□□□ -0.13
UBE2D3-220ENST00000505307 DNAH6Q9C0G6 4158 aa14.26□□□□□ -0.13
UBE2D3-220ENST00000505307 ZNF701M0R085 212 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 NDUFB6O95139 128 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 RRN3P1Q2M238 152 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 FAM222AQ5U5X8 452 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 C1orf158Q8N1D5 194 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 C20orf173Q96LM9 149 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 IGF2BP2-AS1Q96M15 143 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 SRRQ9GZT4 340 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 HECTD4Q9Y4D8 3996 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 HERC2O95714 4834 aa14.25□□□□□ -0.13
UBE2D3-220ENST00000505307 LOC102723971A0A1B0GUV8 181 aa14.24□□□□□ -0.13
UBE2D3-220ENST00000505307 H3BP45 60 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms