RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RYR3Q15413 4870 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 LCE6AA0A183 80 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 L7N2F9 121 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 MBPP02686 304 aaPredicted RBP10.43□□□□□ -0.74
HOXC9-202ENST00000504557 C4BPBP20851 252 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 BCAP31P51572 246 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 PAX9P55771 341 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 VAMP2P63027 116 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
HOXC9-202ENST00000504557 GATAD1Q8WUU5 269 aa10.43□□□□□ -0.74
HOXC9-202ENST00000504557 WDR12Q9GZL7 423 aaKnown RBP10.43□□□□□ -0.74
HOXC9-202ENST00000504557 A6NHS1 94 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 IL5P05113 134 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 S100A10P60903 97 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 CYP2G1PQ6ZSU1 146 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 TMEM144Q7Z5S9 345 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 OR10P1Q8NGE3 313 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 ENKURQ8TC29 256 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 TMEM147Q9BVK8 224 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 MGAT4CQ9UBM8 478 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 FBXL17Q9UF56 701 aa10.42□□□□□ -0.74
HOXC9-202ENST00000504557 PMS2P5A8MQ11 134 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 OR5G3P0C626 314 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 FXYD7P58549 80 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 FGL1Q08830 312 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 SLC38A11Q08AI6 406 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 TMEM14EPQ6UXP3 125 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 TMEM217Q8N7C4 229 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 SLC25A32Q9H2D1 315 aa10.41□□□□□ -0.74
HOXC9-202ENST00000504557 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.74
HOXC9-202ENST00000504557 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 TSC22D2O75157 780 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 CFDP00746 253 aaPredicted RBP10.4□□□□□ -0.74
HOXC9-202ENST00000504557 LINC00869P0C866 280 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 SPP1P10451 314 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 ID1P41134 155 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 CAV2P51636 162 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 DLK1P80370 383 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 ASAH1Q13510 395 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 C1orf194Q5T5A4 169 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 MORN3Q6PF18 240 aaPredicted RBP10.4□□□□□ -0.74
HOXC9-202ENST00000504557 RSG1Q9BU20 258 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 SCRT1Q9BWW7 348 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 PTTG2Q9NZH5 202 aa10.4□□□□□ -0.74
HOXC9-202ENST00000504557 ZNF98A6NK75 572 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 K7EPK0 472 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 UPK1BO75841 260 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 JTBO76095 146 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
HOXC9-202ENST00000504557 GALR1P47211 349 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 NANOS2P60321 138 aaKnown RBP10.39□□□□□ -0.75
HOXC9-202ENST00000504557 RAP2BP61225 183 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 LINC00299Q6ZSB3 139 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 UHRF2Q96PU4 802 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 XCL2Q9UBD3 114 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
HOXC9-202ENST00000504557 FAM24AA6NFZ4 105 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 F6UB75 175 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 H3BMM0 161 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 CST7O76096 145 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 PSMB3P49720 205 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 TAS2R30P59541 319 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 IFITM3Q01628 133 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 ARL6Q9H0F7 186 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 NPVFQ9HCQ7 196 aa10.38□□□□□ -0.75
HOXC9-202ENST00000504557 IGHV3OR16-12A0A075B7B8 117 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 NUPR2A6NF83 97 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 GOSR2O14653 212 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 HYPMO75409 117 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 SIX6O95475 246 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
HOXC9-202ENST00000504557 ATF4P18848 351 aaPredicted RBP10.37□□□□□ -0.75
HOXC9-202ENST00000504557 NUTF2P61970 127 aaKnown RBP10.37□□□□□ -0.75
HOXC9-202ENST00000504557 RAB32Q13637 225 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 TEPPQ6URK8 271 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 C11orf45Q8TAV5 145 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 C20orf173Q96LM9 149 aa10.37□□□□□ -0.75
HOXC9-202ENST00000504557 SLC25A39Q9BZJ4 359 aaPredicted RBP10.37□□□□□ -0.75
HOXC9-202ENST00000504557 IGHV4-28A0A0C4DH34 117 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 H3BRN7 92 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 SOCS3O14543 225 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 HLA-DRB4P13762 266 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 PVALBP20472 110 aaPredicted RBP10.36□□□□□ -0.75
HOXC9-202ENST00000504557 S100A7P31151 101 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 TMEM41BQ5BJD5 291 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 EBLN2Q6P2I7 272 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
HOXC9-202ENST00000504557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.36□□□□□ -0.75
HOXC9-202ENST00000504557 PHLDA1Q8WV24 401 aaPredicted RBP10.36□□□□□ -0.75
HOXC9-202ENST00000504557 SAV1Q9H4B6 383 aaPredicted RBP10.36□□□□□ -0.75
HOXC9-202ENST00000504557 GPN1Q9HCN4 374 aaPredicted RBP10.36□□□□□ -0.75
HOXC9-202ENST00000504557 SEPSECSQ9HD40 501 aaKnown RBP10.36□□□□□ -0.75
HOXC9-202ENST00000504557 HLA-DRB4X5D2U9 266 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms