RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CCL17Q92583 94 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 RNF5Q99942 180 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 JKAMPQ9P055 326 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 LOC400499M0QZD8 3231 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 IGHV1-24A0A0C4DH33 117 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 IGLV1-47P01700 117 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
SNF8-203ENST00000504000 LIPFP07098 398 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 RUSC1-AS1Q66K80 236 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 Q86TA4 180 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
SNF8-203ENST00000504000 BDP1A6H8Y1 2624 aa11.95□□□□□ -0.5
SNF8-203ENST00000504000 A0A1B0GW15 77 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 LEPROTL1O95214 131 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 THBDP07204 575 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 FAM87AP0C7U9 286 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 WFDC8Q8IUA0 241 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
SNF8-203ENST00000504000 A0A0G2JNJ9 132 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 OR4C46A6NHA9 309 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 ENSAO43768 121 aaKnown RBP11.93□□□□□ -0.5
SNF8-203ENST00000504000 IGLV2-11P01706 119 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 RBP4P02753 201 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 IGLC1P0CG04 106 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
SNF8-203ENST00000504000 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 PPP1R27Q86WC6 154 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 PGLYRP4Q96LB8 373 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 Q9UFV3 132 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 ICE1Q9Y2F5 2266 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 SVILO95425 2214 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 COL8A1P27658 744 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 SLC25A39Q9BZJ4 359 aaPredicted RBP11.93□□□□□ -0.5
SNF8-203ENST00000504000 TMEM191AQ9H0A3 160 aa11.93□□□□□ -0.5
SNF8-203ENST00000504000 SPENQ96T58 3664 aaKnown RBP11.93□□□□□ -0.5
SNF8-203ENST00000504000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.92□□□□□ -0.5
SNF8-203ENST00000504000 OVOL3O00110 214 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 PRRG2O14669 202 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 CHEK1O14757 476 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 TCF21O43680 179 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 PSG1P11464 419 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 SPATA12Q7Z6I5 190 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 KIR3DL3Q8N743 410 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 TMEM75Q8N9X5 138 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 SGK494Q96LW2 274 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 ZNF835Q9Y2P0 537 aa11.92□□□□□ -0.5
SNF8-203ENST00000504000 I3L2K1 104 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 HLA-DRB1P01911 266 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 MS4A6AQ9H2W1 248 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 HSPB8Q9UJY1 196 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 INSIG2Q9Y5U4 225 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 IGHV1-3A0A0C4DH29 117 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 CCL25O15444 150 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 PTTG1IPP53801 180 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 Q6AWC8 147 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 SCNM1Q9BWG6 230 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 MAP1LC3CQ9BXW4 147 aa11.91□□□□□ -0.5
SNF8-203ENST00000504000 BUB1B-PAK6H3BSN5 160 aa11.9□□□□□ -0.5
SNF8-203ENST00000504000 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
SNF8-203ENST00000504000 A0A1B0GUT8 65 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 K7EP13 123 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 RIGQ13278 110 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 TRBV19A0A075B6N1 114 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 IGHV3-72A0A0B4J1Y9 119 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 HSBP1L1C9JCN9 74 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 K7EQM0 130 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 LYZP61626 148 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 SLC25A34Q6PIV7 304 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
SNF8-203ENST00000504000 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
SNF8-203ENST00000504000 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
SNF8-203ENST00000504000 K7EM74 188 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 IGKV1-17P01599 117 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 CNTFRP26992 372 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 RPS20P60866 119 aaKnown RBP11.88□□□□□ -0.51
SNF8-203ENST00000504000 C12orf54Q6X4T0 127 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 S100A7AQ86SG5 101 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 CIARTQ8N365 385 aaPredicted RBP11.88□□□□□ -0.51
SNF8-203ENST00000504000 PRSS33Q8NF86 280 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
SNF8-203ENST00000504000 CUL9Q8IWT3 2517 aa11.87□□□□□ -0.51
SNF8-203ENST00000504000 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
SNF8-203ENST00000504000 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
SNF8-203ENST00000504000 SHISA9B4DS77 424 aa11.87□□□□□ -0.51
SNF8-203ENST00000504000 LINC01545Q5VT33 79 aa11.87□□□□□ -0.51
SNF8-203ENST00000504000 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
SNF8-203ENST00000504000 PRNTQ86SH4 94 aa11.87□□□□□ -0.51
SNF8-203ENST00000504000 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms