RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 LINC01587Q99440 93 aa10.86□□□□□ -0.67
PDLIM7-210ENST00000503827 ADAP1O75689 374 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 PGAM2P15259 253 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 HTN1P15515 57 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 ELK1P19419 428 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 PRSS3P35030 304 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 AQP4P55087 323 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 RND3P61587 244 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 HAMPP81172 84 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 SPARTQ8N0X7 666 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 TMEM256Q8N2U0 113 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 OR52E5Q8NH55 327 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 PPP1R14BQ96C90 147 aa10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 NOP10Q9NPE3 64 aaKnown RBP10.85□□□□□ -0.67
PDLIM7-210ENST00000503827 TRAV12-2A0A075B6T6 113 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 A0A087WTM6 91 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 A0A0G2JRQ6 117 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 C3orf85A0A1B0GTC6 90 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 H3BNG1 76 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 ZNF701M0R085 212 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 SIVA1O15304 175 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 DNAH10OSP0CZ25 163 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 TAS2R60P59551 318 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 TMEM144Q7Z5S9 345 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 NFE4Q86UQ8 179 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 NOXA1Q86UR1 476 aa10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 ZNF486Q96H40 463 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-210ENST00000503827 TMEM127O75204 238 aa10.83□□□□□ -0.68
PDLIM7-210ENST00000503827 ZNF182P17025 639 aaPredicted RBP10.83□□□□□ -0.68
PDLIM7-210ENST00000503827 PIGPP57054 158 aa10.83□□□□□ -0.68
PDLIM7-210ENST00000503827 LYZP61626 148 aa10.83□□□□□ -0.68
PDLIM7-210ENST00000503827 KLF9Q13886 244 aaPredicted RBP10.83□□□□□ -0.68
PDLIM7-210ENST00000503827 ZNF493Q6ZR52 646 aa10.83□□□□□ -0.68
PDLIM7-210ENST00000503827 ZFP92A6NM28 416 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 CEBPZOSA8MTT3 80 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 PI3P19957 117 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 HOXA5P20719 270 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 RCVRNP35243 200 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 GALR1P47211 349 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 AARDQ4LEZ3 155 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 UBE2NLQ5JXB2 153 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 FAM219AQ8IW50 185 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 TMEM170AQ8WVE7 144 aa10.82□□□□□ -0.68
PDLIM7-210ENST00000503827 BOLA2-SMG1P6H3BVE0 249 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 FABP1P07148 127 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 UCP1P25874 307 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 ZNF90Q03938 601 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 SP6Q3SY56 376 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 TMEM263Q8WUH6 116 aaKnown RBP10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 SLC25A39Q9BZJ4 359 aaPredicted RBP10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 PLA2G2DQ9UNK4 145 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
PDLIM7-210ENST00000503827 SNRPGP15A8MWD9 76 aa10.8□□□□□ -0.68
PDLIM7-210ENST00000503827 RNASE8Q8TDE3 154 aaKnown RBP10.8□□□□□ -0.68
PDLIM7-210ENST00000503827 GPX8Q8TED1 209 aa10.8□□□□□ -0.68
PDLIM7-210ENST00000503827 RSG1Q9BU20 258 aa10.8□□□□□ -0.68
PDLIM7-210ENST00000503827 PPP1R14DQ9NXH3 145 aa10.8□□□□□ -0.68
PDLIM7-210ENST00000503827 HMCN2Q8NDA2 5059 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 LOC100506127A0A0U1RQW1 187 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 RHOBP62745 196 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 GAMTQ14353 236 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 NMSQ5H8A3 153 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 COPZ2Q9P299 210 aa10.79□□□□□ -0.68
PDLIM7-210ENST00000503827 A0A096LPF7 62 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GAGE12BA1L429 117 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 ZNF98A6NK75 572 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GABARAPH6UMI1 98 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GAGE7O76087 117 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GABARAPO95166 117 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 ARRDC1Q8N5I2 433 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 SAMD12Q8N8I0 201 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 CCDC71LQ8N9Z2 235 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 CNBD2Q96M20 576 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 SLC25A32Q9H2D1 315 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 CACNG5Q9UF02 275 aa10.78□□□□□ -0.68
PDLIM7-210ENST00000503827 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 B3GALNT1O75752 331 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 RLN2P04090 185 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 GABARAPL2P60520 117 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 OR2F1Q13607 317 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 CROCCP3Q8IVE0 287 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 SLC35E1Q96K37 410 aa10.77□□□□□ -0.69
PDLIM7-210ENST00000503827 NXPH4O95158 308 aa10.76□□□□□ -0.69
PDLIM7-210ENST00000503827 IGFL4Q6B9Z1 124 aa10.76□□□□□ -0.69
PDLIM7-210ENST00000503827 LHFPL1Q86WI0 220 aa10.76□□□□□ -0.69
PDLIM7-210ENST00000503827 CCDC28AQ8IWP9 274 aa10.76□□□□□ -0.69
PDLIM7-210ENST00000503827 RNF182Q8N6D2 247 aa10.76□□□□□ -0.69
PDLIM7-210ENST00000503827 OR1B1Q8NGR6 318 aa10.76□□□□□ -0.69
PDLIM7-210ENST00000503827 CACFD1Q9UGQ2 172 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms