RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 IGF2BP2-AS1Q96M15 143 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 IMMP2LQ96T52 175 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 ZFHX3Q15911 3703 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 SH2D7A6NKC9 451 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 GGCTO75223 188 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 AMY1AP04745 511 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 S100A2P29034 98 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 ECSCRQ19T08 205 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 ZNF600Q6ZNG1 722 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 SHANK2-AS3Q9BTD1 123 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 FBXL7Q9UJT9 491 aa16.71■□□□□ 0.27
UBE2D3-216ENST00000503742 H3BRN7 92 aa16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 AVPP01185 164 aa16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 SNRPCP09234 159 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 RANP62826 216 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 Q56UQ5 140 aa16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 VN1R17PQ8TDU5 208 aa16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 BLNKQ8WV28 456 aa16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 TXN2Q99757 166 aa16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 GAR1Q9NY12 217 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 SOX21Q9Y651 276 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-216ENST00000503742 IL4P05112 153 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 TAS2R60P59551 318 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 KRTAP10-9P60411 292 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 OR10G8Q8NGN5 311 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 CDC42EP3Q9UKI2 254 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 TRBV9A0A0B4J1U6 114 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 PEX7O00628 323 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 IGLV2-8P01709 118 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 TRGC2P03986 189 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 COL8A1P27658 744 aa16.69■□□□□ 0.26
UBE2D3-216ENST00000503742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.69■□□□□ 0.263e-7■■■■□ 19.8
UBE2D3-216ENST00000503742 CSMD2Q7Z408 3487 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 CELSR1Q9NYQ6 3014 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 G3V318 75 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 FOXL1Q12952 345 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 DNLZQ5SXM8 178 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 LINC01356Q8N9X3 169 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 SRD5A3Q9H8P0 318 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 PHOX2AO14813 284 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 IGHV3-23P01764 117 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 CTSGP08311 255 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H1EP10412 219 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 NDUFA6P56556 154 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 KCNIP4Q6PIL6 250 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 LINC00479Q96M42 142 aa16.68■□□□□ 0.26
UBE2D3-216ENST00000503742 A0A1W2PPQ1 181 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 PGPA6NDG6 321 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BKO60814 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 GCGP01275 180 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BJP06899 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BOP23527 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BBP33778 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 CNN1P51911 297 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 CRIP2P52943 208 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BDP58876 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BCP62807 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 USF2Q15853 346 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST2H2BEQ16778 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BHQ93079 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BNQ99877 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 HIST1H2BMQ99879 126 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 ZNF586Q9NXT0 402 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 EPDR1Q9UM22 224 aa16.67■□□□□ 0.26
UBE2D3-216ENST00000503742 OR5I1Q13606 314 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 C19orf54Q5BKX5 351 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 ZNF502Q8TBZ5 544 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 ANKRD17O75179 2603 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 A6NDX4 124 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 OR2T8A6NH00 312 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 TYMSP04818 313 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 FAM3BP58499 235 aaPredicted RBP16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 RHOGP84095 191 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 C15orf32Q32M92 178 aa16.66■□□□□ 0.26
UBE2D3-216ENST00000503742 MRPS12O15235 138 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 SLC25A5P05141 298 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 ADMP35318 185 aa16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 GNG5P63218 68 aa16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 BCL6BQ8N143 479 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 CHRDL1Q9BU40 450 aa16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 Q9H3A6 140 aa16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 BEX4Q9NWD9 120 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 ZMAT5Q9UDW3 170 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-216ENST00000503742 H3BTX0 84 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 SCGB2A1O75556 95 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 BPIFA4PQ86YQ2 179 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 C5orf17Q8NAS9 161 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 ZNF414Q96IQ9 312 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 KLF12Q9Y4X4 402 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 IFITM10A6NMD0 228 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 PPP5D1E7EU14 171 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 H3BUX3 64 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 IGLC2P0DOY2 106 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 LOXL1Q08397 574 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 TMEM183BQ1AE95 376 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 S100A7AQ86SG5 101 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 V9GYV3 84 aa16.64■□□□□ 0.25
UBE2D3-216ENST00000503742 ERVFC1-1P60608 527 aa16.63■□□□□ 0.25
UBE2D3-216ENST00000503742 FRZBQ92765 325 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms