RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TMEM95Q3KNT9 176 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 PATE2Q6UY27 113 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 Q6ZSV7 163 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 MIR17HGQ75NE6 70 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 ZNF329Q86UD4 541 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 BPIFA4PQ86YQ2 179 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 OR5AU1Q8NGC0 362 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 GPR82Q96P67 336 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 TCEAL7Q9BRU2 100 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 SHANK2-AS3Q9BTD1 123 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 CHRDL1Q9BU40 450 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 PAXXQ9BUH6 204 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 SLC35B3Q9H1N7 401 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 KLK15Q9H2R5 256 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 OR51M1Q9H341 326 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 TMEM14CQ9P0S9 112 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 PEF1Q9UBV8 284 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 S4R3C0 116 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 ACANP16112 2415 aa6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 SONP18583 2426 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-202ENST00000503338 CSMD1Q96PZ7 3565 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 A0A1B0GUS0 222 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 A0A1W2PRE2 83 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 F6UZH7 168 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 HMGB3O15347 200 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 PDE6DO43924 150 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 LGALS1P09382 135 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 RPL7P18124 248 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 UBE2L3P68036 154 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 DEFA5Q01523 94 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 MEF2BQ02080 365 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 HAGHQ16775 308 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 FAM106AQ4KMX7 169 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 C1orf194Q5T5A4 169 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 SPATA31B1PQ5VZV4 182 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 TOMM20LQ6UXN7 152 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 KLHDC1Q8N7A1 406 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 OR4F17Q8NGA8 305 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 OR4F5Q8NH21 305 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 FAM167A-AS1Q96KT0 104 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 OR4F4Q96R69 305 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 METTL26Q96S19 204 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 SCRT1Q9BWW7 348 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 SEC11CQ9BY50 192 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 TEX15Q9BXT5 2789 aa6.29□□□□□ -1.4
TOPBP1-202ENST00000503338 A0A1W2PS18 150 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 ZNF98A6NK75 572 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 C11orf94C9JXX5 98 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 F8W036 122 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 PAGE4O60829 102 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 SFTA3P0C7M3 94 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 HIST1H1EP10412 219 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 NPPCP23582 126 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 CDX1P47902 265 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 MEOX2P50222 304 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 PDE6HQ13956 83 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 KIAA0141Q14154 515 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 ICAM4Q14773 271 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 USF2Q15853 346 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 FAM74A3Q4VXF1 159 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 SOHLH1Q5JUK2 328 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 GPHB5Q86YW7 130 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 RXFP4Q8TDU9 374 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 UHRF2Q96PU4 802 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 ELOVL1Q9BW60 279 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 TMPRSS5Q9H3S3 457 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 TMEM231Q9H6L2 316 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
TOPBP1-202ENST00000503338 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 K7EMT4 169 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 IGHV3-11P01762 117 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 SRP19P09132 144 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 NBEAP1P0C6P0 100 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 CRYBB3P26998 211 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 RPEL1Q2QD12 228 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 C10orf91Q5T1B1 145 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 CST9LP1Q5W188 147 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 SVBPQ8N300 66 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 C4orf3Q8WVX3 66 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 RPUSD4Q96CM3 377 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF503Q96F45 646 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 GRAMD2BQ96HH9 432 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 RARRES2Q99969 163 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 CARHSP1Q9Y2V2 147 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 UFC1Q9Y3C8 167 aa6.27□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF469Q96JG9 3925 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 SVEP1Q4LDE5 3571 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 TRAV5A0A0B4J249 113 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 PPP5D1E7EU14 171 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 LGALS9O00182 355 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 ZNF253O75346 499 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 OR10J4P0C629 311 aa6.26□□□□□ -1.41
TOPBP1-202ENST00000503338 GP9P14770 177 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms