RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 TOMM20LQ6UXN7 152 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 KIR2DL5AQ8N109 375 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 CFHR4Q92496 578 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 SGK494Q96LW2 274 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 RBM14Q96PK6 669 aaKnown RBP13.14□□□□□ -0.31
VCAN-204ENST00000502527 OTORQ9NRC9 128 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 K7EIM0 57 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 IGKV1-17P01599 117 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 CD33P20138 364 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 PRTN3P24158 256 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 ATP5L2Q7Z4Y8 100 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 TMEM190Q8WZ59 177 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 NEU1Q99519 415 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 ZNF586Q9NXT0 402 aa13.14□□□□□ -0.31
VCAN-204ENST00000502527 MRPL27Q9P0M9 148 aaKnown RBP13.14□□□□□ -0.31
VCAN-204ENST00000502527 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 ODF3BA8MYP8 253 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 H3BTX0 84 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 NDUFA3O95167 84 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 SLAQ13239 276 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 LINC00469Q8N7U9 141 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
VCAN-204ENST00000502527 ZNF492Q9P255 531 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 SPTA1P02549 2419 aa13.13□□□□□ -0.31
VCAN-204ENST00000502527 A0A1W2PS18 150 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 CT83Q5H943 113 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 GPR6P46095 362 aaPredicted RBP13.12□□□□□ -0.31
VCAN-204ENST00000502527 AMTP48728 403 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 KLRD1Q13241 179 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 C2orf88Q9BSF0 95 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 FAM103A1Q9BTL3 118 aaKnown RBP13.12□□□□□ -0.31
VCAN-204ENST00000502527 PRSS22Q9GZN4 317 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
VCAN-204ENST00000502527 TBL2Q9Y4P3 447 aaKnown RBP13.12□□□□□ -0.31
VCAN-204ENST00000502527 A8MWL6 223 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 P01737 135 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 HES1Q14469 280 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 SHANK2-AS3Q9BTD1 123 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 TPRP12270 2363 aaKnown RBP13.11□□□□□ -0.31
VCAN-204ENST00000502527 CDKN1AP38936 164 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 GDF5OSQ5U4N7 250 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
VCAN-204ENST00000502527 DAZAP1Q96EP5 407 aaKnown RBP13.11□□□□□ -0.31
VCAN-204ENST00000502527 C19orf71A6NCJ1 209 aa13.1□□□□□ -0.31
VCAN-204ENST00000502527 ZNF324O75467 553 aaPredicted RBP13.1□□□□□ -0.31
VCAN-204ENST00000502527 BPIFA4PQ86YQ2 179 aa13.1□□□□□ -0.31
VCAN-204ENST00000502527 VN1R17PQ8TDU5 208 aa13.1□□□□□ -0.31
VCAN-204ENST00000502527 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
VCAN-204ENST00000502527 FBXL7Q9UJT9 491 aa13.1□□□□□ -0.31
VCAN-204ENST00000502527 A0A1B0GXF2 115 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 OR2J3O76001 311 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 PMCHP20382 165 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 CD24P25063 80 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
VCAN-204ENST00000502527 OR4F17Q8NGA8 305 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 C18orf32Q8TCD1 76 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
VCAN-204ENST00000502527 SOX21Q9Y651 276 aaPredicted RBP13.09□□□□□ -0.31
VCAN-204ENST00000502527 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 H3BRN7 92 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 CAMPP49913 170 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 KRTDAPP60985 99 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 S100A7AQ86SG5 101 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 Q86TA4 180 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 KIR3DL3Q8N743 410 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 C20orf144Q9BQM9 153 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
VCAN-204ENST00000502527 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 A0A1B0GV90 55 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 A0A1W2PRD5 423 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 A0A1W2PRF3 423 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 A0A1W2PRM7 423 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 OOSP1A8MZH6 123 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 KLF5Q13887 457 aaPredicted RBP13.08□□□□□ -0.32
VCAN-204ENST00000502527 TCF24Q7RTU0 167 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 DTX2Q86UW9 622 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 EXOC3-AS1Q8N2X6 119 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 ZNF491Q8N8L2 437 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 VWC2LB2RUY7 222 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 HOXB4P17483 251 aaPredicted RBP13.08□□□□□ -0.32
VCAN-204ENST00000502527 HBBP68871 147 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 ZNF562Q6V9R5 426 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 GOLT1AQ6ZVE7 132 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 ABCA4P78363 2273 aa13.08□□□□□ -0.32
VCAN-204ENST00000502527 FAM231BA6NCW3 169 aa13.07□□□□□ -0.32
VCAN-204ENST00000502527 IL4P05112 153 aa13.07□□□□□ -0.32
VCAN-204ENST00000502527 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
VCAN-204ENST00000502527 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
VCAN-204ENST00000502527 IGFBPL1Q8WX77 278 aa13.07□□□□□ -0.32
VCAN-204ENST00000502527 ARPC1AQ92747 370 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms