RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 GNB1LQ9BYB4 327 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPRY4Q9C004 299 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 MOB1AQ9H8S9 216 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 SPRR3Q9UBC9 169 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 INSIG2Q9Y5U4 225 aa4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 F11RQ9Y624 299 aaKnown RBP4.71□□□□□ -1.65
SOX2-OT-218ENST00000498731 USP9XQ93008 2570 aaPredicted RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 TRAV17A0A0B4J275 112 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 TIMM8AO60220 97 aaPredicted RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 GRPP07492 148 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 GPM6AP51674 278 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 C12orf54Q6X4T0 127 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 LIN7CQ9NUP9 197 aaKnown RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 DUSP13Q9UII6 198 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 KMT2BQ9UMN6 2715 aaPredicted RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 ABCA4P78363 2273 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 INTS1Q8N201 2190 aaKnown RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 HIST1H1AQ02539 215 aaPredicted RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 AESQ08117 197 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 RSPO1Q2MKA7 263 aaPredicted RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 RPEL1Q2QD12 228 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 Q71RC1 249 aaPredicted RBP4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 VSTM2AQ8TAG5 236 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 LRRC29Q8WV35 223 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 RNF138Q8WVD3 245 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF488Q96MN9 340 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 TMEM70Q9BUB7 260 aa4.71□□□□□ -1.66
SOX2-OT-218ENST00000498731 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 KBTBD11-OT1A0A1B0GTJ5 212 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 SYNGR2O43760 224 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 CA6P23280 308 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 CX3CL1P78423 397 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 SERF2P84101 59 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 C10orf128Q5T292 105 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 PCP2Q8IVA1 136 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 SPIN2AQ99865 258 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 SPIN2BQ9BPZ2 258 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 C1QTNF4Q9BXJ3 329 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 ADAMTS20P59510 1910 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 PGLYRP1O75594 196 aaPredicted RBP4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 IGLV2-14P01704 120 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 APCSP02743 223 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 FAM106CPP0CH98 169 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 FXYD2P54710 66 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 RPL11P62913 178 aaKnown RBP4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 CATR1Q13166 79 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 FAM106AQ4KMX7 169 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 TIMM23BQ5SRD1 257 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 NFE4Q86UQ8 179 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 MDP1Q86V88 176 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 STHQ8IWL8 128 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 C11orf44Q8N8P7 122 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR1L4Q8NGR5 311 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 GALMQ96C23 342 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 NPCDR1Q9BY65 106 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 ERG28Q9UKR5 140 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR2W1Q9Y3N9 320 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 LINC00312Q9Y6C7 94 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 TEP1Q99973 2627 aaKnown RBP4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 TMEM189A5PLL7 270 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 H3BRM9 83 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 NBR2O15453 112 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 PDCD6O75340 191 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 GUSBP1Q15486 140 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 PQLC2Q6ZP29 291 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 FOXI2Q6ZQN5 318 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 AJUBAQ96IF1 538 aa4.7□□□□□ -1.66
SOX2-OT-218ENST00000498731 TACC2O95359 2948 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 MTORP42345 2549 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 PMS2P5A8MQ11 134 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 K7EM74 188 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 SYNGR3O43761 229 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 GPR12P47775 334 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 SYT8Q8NBV8 401 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 C8orf46Q8TAG6 207 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 IL1F10Q8WWZ1 152 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 PP6455Q8WZ26 134 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 PTH2Q96A98 100 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 MRPL16Q9NX20 251 aaKnown RBP4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR1A1Q9P1Q5 309 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 ADGRG4Q8IZF6 3080 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 MED13LQ71F56 2210 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 PLCE1Q9P212 2302 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 hCG_38984A0A1B0GV85 526 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF503-AS2A6NEH8 195 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 REG1AP05451 166 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 RNPS1Q15287 305 aaKnown RBP4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 MDS2Q8NDY4 140 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 SGK494Q96LW2 274 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 DSCAML1Q8TD84 2053 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR11H12B2RN74 326 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 DEGS1O15121 323 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 RS1O15537 224 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 IGLV2-8P01709 118 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 SMIM17P0DL12 118 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 FOXF2Q12947 444 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 CENPWQ5EE01 88 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms