RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CMYA5Q8N3K9 4069 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 HYPMO75409 117 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 CSN3P07498 182 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 FOLR2P14207 255 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 IGLL1P15814 213 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 CBLN1P23435 193 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 NPPCP23582 126 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 BMI1P35226 326 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 ST8SIA2Q92186 375 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 MCRIP2Q9BUT9 160 aaKnown RBP10.31□□□□□ -0.76
CPNE1-227ENST00000498056 ARV1Q9H2C2 271 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 SLC25A32Q9H2D1 315 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 TIMM9Q9Y5J7 89 aa10.31□□□□□ -0.76
CPNE1-227ENST00000498056 K7EMT4 169 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-227ENST00000498056 TPT1P13693 172 aaKnown RBP10.3□□□□□ -0.76
CPNE1-227ENST00000498056 EIF5AP63241 154 aaKnown RBP10.3□□□□□ -0.76
CPNE1-227ENST00000498056 GCSAMLQ5JQS6 135 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 C9orf66Q5T8R8 295 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 PXDC1Q5TGL8 231 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 C10orf113Q5VZT2 155 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 LAMTOR1Q6IAA8 161 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 OR1L4Q8NGR5 311 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 MARC2Q969Z3 335 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 GNPNAT1Q96EK6 184 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-227ENST00000498056 GRAMD2BQ96HH9 432 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 PFDN5Q99471 154 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 PSMG3Q9BT73 122 aaPredicted RBP10.3□□□□□ -0.76
CPNE1-227ENST00000498056 SCRT1Q9BWW7 348 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 TMEM231Q9H6L2 316 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 SLC25A22Q9H936 323 aa10.3□□□□□ -0.76
CPNE1-227ENST00000498056 MRPL27Q9P0M9 148 aaKnown RBP10.3□□□□□ -0.76
CPNE1-227ENST00000498056 H3BRN7 92 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 CRYBB3P26998 211 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 S100A7P31151 101 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 PLP1P60201 277 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 RAB2AP61019 212 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 LEMD1Q68G75 181 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 IL34Q6ZMJ4 242 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 ADAMTSL5Q6ZMM2 481 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 OR2G3Q8NGZ4 309 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 MLXQ9UH92 298 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 SMPXQ9UHP9 88 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 PFDN2Q9UHV9 154 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
CPNE1-227ENST00000498056 NOTCH3Q9UM47 2321 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 ELOA3CA0A087WX78 387 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-227ENST00000498056 A0A1W2PS18 150 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 CHEK1O14757 476 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 ACOT6Q3I5F7 207 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-227ENST00000498056 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 S100A7AQ86SG5 101 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 SLC51BQ86UW2 128 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 SLC25A39Q9BZJ4 359 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-227ENST00000498056 GPR61Q9BZJ8 451 aa10.28□□□□□ -0.76
CPNE1-227ENST00000498056 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 C8orf88P0DMB2 117 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 SPP1P10451 314 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 AKR1C8PQ5T2L2 129 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 MORN5Q5VZ52 161 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 TMED6Q8WW62 240 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 TMEM37Q8WXS4 190 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 RNF2Q99496 336 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 SHANK2-AS3Q9BTD1 123 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 VSIRQ9H7M9 311 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 SIGLEC8Q9NYZ4 499 aa10.27□□□□□ -0.77
CPNE1-227ENST00000498056 ZNF98A6NK75 572 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 BUB3O43684 328 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 M6PRP20645 277 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 INSL3P51460 131 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 RPL11P62913 178 aaKnown RBP10.26□□□□□ -0.77
CPNE1-227ENST00000498056 CD300EQ496F6 205 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-227ENST00000498056 TMEM41BQ5BJD5 291 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 OXLD1Q5BKU9 147 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 TCF24Q7RTU0 167 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 TMEM61Q8N0U2 210 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 OR8I2Q8N0Y5 310 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 GLMPQ8WWB7 406 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 MRPL32Q9BYC8 188 aaKnown RBP10.26□□□□□ -0.77
CPNE1-227ENST00000498056 DNAJC4Q9NNZ3 241 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 TECRQ9NZ01 308 aaKnown RBP10.26□□□□□ -0.77
CPNE1-227ENST00000498056 SORL1Q92673 2214 aa10.26□□□□□ -0.77
CPNE1-227ENST00000498056 IGLV1-51P01701 117 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-227ENST00000498056 RHOBP62745 196 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 SERF2P84101 59 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 SIGLEC15Q6ZMC9 328 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
CPNE1-227ENST00000498056 MIR17HGQ75NE6 70 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms