RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 PSMB3P49720 205 aa8.48□□□□□ -1.05
NUDCD3-211ENST00000497978 SAMD13Q5VXD3 122 aa8.48□□□□□ -1.05
NUDCD3-211ENST00000497978 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
NUDCD3-211ENST00000497978 TRGV9Q99603 122 aa8.48□□□□□ -1.05
NUDCD3-211ENST00000497978 SLC25A21Q9BQT8 299 aaPredicted RBP8.48□□□□□ -1.05
NUDCD3-211ENST00000497978 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
NUDCD3-211ENST00000497978 TMEM189A5PLL7 270 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 SMIM9A6NGZ8 99 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 CFDP00746 253 aaPredicted RBP8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 IGKV3-20P01619 116 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 S100A5P33763 92 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 OR2F1Q13607 317 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 SPATA31B1PQ5VZV4 182 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 GGNBP1Q5YKI7 109 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 FOXI2Q6ZQN5 318 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 LRTM2Q8N967 370 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 DEDD2Q8WXF8 326 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 NEU1Q99519 415 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 WDR12Q9GZL7 423 aaKnown RBP8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 SAV1Q9H4B6 383 aaPredicted RBP8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 TMED3Q9Y3Q3 217 aa8.47□□□□□ -1.05
NUDCD3-211ENST00000497978 ISLRO14498 428 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 SFT2D2O95562 160 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 SPART-AS1P0CW21 52 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 S100A7P31151 101 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF705AQ6ZN79 300 aaPredicted RBP8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF767PQ75MW2 155 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 THAP8Q8NA92 274 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 OR4B1Q8NGF8 309 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 TRIM63Q969Q1 353 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 CLUHP3Q96NS8 147 aa8.46□□□□□ -1.06
NUDCD3-211ENST00000497978 IGHV3OR16-12A0A075B7B8 117 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 TEX48A0A1B0GUV7 120 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 CCDC160A6NGH7 325 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 WRBO00258 174 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 SYNGR2O43760 224 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 AMBPP02760 352 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 GALR1P47211 349 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 MEOX2P50222 304 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 EMP1P54849 157 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 FXYD7P58549 80 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 GDF5OSQ5U4N7 250 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 NDUFAF3Q9BU61 184 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 MAGT1Q9H0U3 335 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 RPRMQ9NS64 109 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 GOLT1BQ9Y3E0 138 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 RFNGQ9Y644 331 aa8.45□□□□□ -1.06
NUDCD3-211ENST00000497978 KMT2AQ03164 3969 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF705FA8MVS1 300 aaPredicted RBP8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 SOCS3O14543 225 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 HOXB5P09067 269 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF705DP0CH99 300 aaPredicted RBP8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF705BP0CI00 300 aaPredicted RBP8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 P0DMU3 169 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 DEFB1P60022 68 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 PSG9Q00887 426 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 PPP1R1AQ13522 171 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 BPIFCQ8NFQ6 507 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 C16orf92Q96LL3 132 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 C7orf50Q9BRJ6 194 aaKnown RBP8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 SLC45A2Q9UMX9 530 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 V9GYH0 126 aa8.44□□□□□ -1.06
NUDCD3-211ENST00000497978 IGKV1OR2-108A0A075B7D4 117 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 ORM2P19652 201 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 PAX9P55771 341 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 UBE2MP61081 183 aaKnown RBP8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 AKR1C1Q04828 323 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF79Q15937 498 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 FAM78BQ5VT40 261 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 POM121L12Q8N7R1 296 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF709Q8N972 641 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 OR4D5Q8NGN0 318 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 GPR82Q96P67 336 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 TMEM147Q9BVK8 224 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 SLC25A22Q9H936 323 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 STRAPQ9Y3F4 350 aaKnown RBP8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 FRAS1Q86XX4 4008 aa8.43□□□□□ -1.06
NUDCD3-211ENST00000497978 A0A0J9YX75 114 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 ZNF98A6NK75 572 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 HBE1P02100 147 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 INPP1P49441 399 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 SPANXN2Q5MJ10 180 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 LINC00336Q6ZUF6 198 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 OR1B1Q8NGR6 318 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 FAM210BQ96KR6 192 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 RSG1Q9BU20 258 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 SLC35B3Q9H1N7 401 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 SLC25A32Q9H2D1 315 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 DOK5Q9P104 306 aa8.42□□□□□ -1.06
NUDCD3-211ENST00000497978 PRSS46E5RG02 174 aa8.41□□□□□ -1.06
NUDCD3-211ENST00000497978 F6UB75 175 aa8.41□□□□□ -1.06
NUDCD3-211ENST00000497978 H3BP45 60 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms