RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 TMEM252Q8N6L7 170 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 KIR2DL5BQ8NHK3 375 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 ASB13Q8WXK3 278 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 TM2D3Q9BRN9 247 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 PBDC1Q9BVG4 233 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 MS4A6AQ9H2W1 248 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 SLC45A2Q9UMX9 530 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 IGKV3-7A0A075B6H7 116 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 IGHV3OR16-13A0A075B7E8 117 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 IGHV3-49A0A0A0MS15 119 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 IGHV3-74A0A0B4J1X5 117 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 PRSS46E5RG02 174 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 C3orf84H3BNL1 204 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 NUTF2P61970 127 aaKnown RBP7.77□□□□□ -1.17
PTPRN-218ENST00000497977 HBG1P69891 147 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 HBG2P69892 147 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 BAXQ07812 192 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 TMEM41BQ5BJD5 291 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 PXDC1Q5TGL8 231 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 FAM90A2PQ658T7 463 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 LINC00322Q6ZN03 302 aaPredicted RBP7.77□□□□□ -1.17
PTPRN-218ENST00000497977 Q6ZWC4 215 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 GBGT1Q8N5D6 347 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 ST8SIA2Q92186 375 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 RNF125Q96EQ8 232 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 GPR82Q96P67 336 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 RNF126Q9BV68 326 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 SLC25A31Q9H0C2 315 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 SELENOKQ9Y6D0 94 aa7.77□□□□□ -1.17
PTPRN-218ENST00000497977 PMS2P5A8MQ11 134 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 G3V3Q6 166 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 ARPC5O15511 151 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 BUB3O43684 328 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 EDN2P20800 178 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 RPL12P30050 165 aaKnown RBP7.76□□□□□ -1.17
PTPRN-218ENST00000497977 S100A11P31949 105 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 DLK1P80370 383 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 NHLH2Q02577 135 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 OR2F1Q13607 317 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 ATP6V1FQ16864 119 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 C16orf54Q6UWD8 224 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 STHQ8IWL8 128 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 OR8I2Q8N0Y5 310 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 THAP8Q8NA92 274 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 STXBP6Q8NFX7 210 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 OR5C1Q8NGR4 320 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 TMEM147Q9BVK8 224 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 CSTL1Q9H114 145 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 TP53TG1Q9Y2A0 90 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 HSPB11Q9Y547 144 aa7.76□□□□□ -1.17
PTPRN-218ENST00000497977 IGHV3-66A0A0C4DH42 116 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 GALR1P47211 349 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 MEOX2P50222 304 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 LYZP61626 148 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 CD300CQ08708 224 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 SIGLEC15Q6ZMC9 328 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 Q6ZRG5 221 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 NRN1Q9NPD7 142 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 UQCC1Q9NVA1 299 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 UBQLN2Q9UHD9 624 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 U3KQE9 123 aa7.75□□□□□ -1.17
PTPRN-218ENST00000497977 RBMY1BA6NDE4 496 aaKnown RBP7.74□□□□□ -1.17
PTPRN-218ENST00000497977 RBMY1EA6NEQ0 496 aaKnown RBP7.74□□□□□ -1.17
PTPRN-218ENST00000497977 HYPMO75409 117 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 APOHP02749 345 aaPredicted RBP7.74□□□□□ -1.17
PTPRN-218ENST00000497977 RBMY1DP0C7P1 496 aaKnown RBP7.74□□□□□ -1.17
PTPRN-218ENST00000497977 LYL1P12980 280 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 ORM2P19652 201 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 FGF7P21781 194 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 ZNF90Q03938 601 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 MORN3Q6PF18 240 aaPredicted RBP7.74□□□□□ -1.17
PTPRN-218ENST00000497977 ZNF546Q86UE3 836 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 INO80EQ8NBZ0 244 aaPredicted RBP7.74□□□□□ -1.17
PTPRN-218ENST00000497977 ZNF414Q96IQ9 312 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 ST6GAL2Q96JF0 529 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 CITED4Q96RK1 184 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 ATP5SQ99766 215 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 DOK5Q9P104 306 aa7.74□□□□□ -1.17
PTPRN-218ENST00000497977 IGKV1D-37A0A075B6S9 117 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 IGKV1OR2-108A0A075B7D4 117 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
PTPRN-218ENST00000497977 RNF222A6NCQ9 220 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 SPRY2O43597 315 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 GATA2P23769 480 aaPredicted RBP7.73□□□□□ -1.17
PTPRN-218ENST00000497977 DEFB131AP59861 70 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 USF2Q15853 346 aaPredicted RBP7.73□□□□□ -1.17
PTPRN-218ENST00000497977 SPATA31B1PQ5VZV4 182 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 CYP2G1PQ6ZSU1 146 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 OR1B1Q8NGR6 318 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 C1QTNF4Q9BXJ3 329 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 TNFSF18Q9UNG2 199 aa7.73□□□□□ -1.17
PTPRN-218ENST00000497977 K7EQG2 157 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 MPDU1O75352 247 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 LINC00869P0C866 280 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 SPP1P10451 314 aa7.72□□□□□ -1.17
PTPRN-218ENST00000497977 ODF3L2Q3SX64 289 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms