RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 C20orf24Q9BUV8 137 aa12.22□□□□□ -0.45
PTK7-220ENST00000497957 TMPRSS5Q9H3S3 457 aa12.22□□□□□ -0.45
PTK7-220ENST00000497957 DNAJC4Q9NNZ3 241 aa12.22□□□□□ -0.45
PTK7-220ENST00000497957 HSPB1P04792 205 aaKnown RBP12.21□□□□□ -0.45
PTK7-220ENST00000497957 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.45
PTK7-220ENST00000497957 C19orf24Q9BVV8 132 aa12.21□□□□□ -0.45
PTK7-220ENST00000497957 SLC25A2Q9BXI2 301 aa12.21□□□□□ -0.45
PTK7-220ENST00000497957 ACTR3CQ9C0K3 210 aaPredicted RBP12.21□□□□□ -0.45
PTK7-220ENST00000497957 GAR1Q9NY12 217 aaKnown RBP12.21□□□□□ -0.45
PTK7-220ENST00000497957 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.45
PTK7-220ENST00000497957 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 H3BRN7 92 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 FABP1P07148 127 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
PTK7-220ENST00000497957 RELQ04864 619 aaPredicted RBP12.2□□□□□ -0.46
PTK7-220ENST00000497957 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 CLLU1Q5K131 121 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 LINC00305Q7Z4B0 112 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 OR11H1Q8NG94 326 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 OR1L4Q8NGR5 311 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 OR1N2Q8NGR9 330 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 GATAD1Q8WUU5 269 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 SFT2D1Q8WV19 159 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 SLC25A39Q9BZJ4 359 aaPredicted RBP12.2□□□□□ -0.46
PTK7-220ENST00000497957 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 FUT9Q9Y231 359 aa12.2□□□□□ -0.46
PTK7-220ENST00000497957 TSSC4Q9Y5U2 329 aaPredicted RBP12.2□□□□□ -0.46
PTK7-220ENST00000497957 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 NDUFA4O00483 81 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 MBP02144 154 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 RAB5CP51148 216 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 SYNJ2BPP57105 145 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 FOXL1Q12952 345 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 MBD3L1Q8WWY6 194 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 TMEM190Q8WZ59 177 aa12.19□□□□□ -0.46
PTK7-220ENST00000497957 A0A1W2PPV4 95 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 LINC01619G3V211 115 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 H3BTX0 84 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 PYYP10082 97 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 RHOBP62745 196 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 RPEL1Q2QD12 228 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 FAM209BQ5JX69 171 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 SAT2Q96F10 170 aaPredicted RBP12.18□□□□□ -0.46
PTK7-220ENST00000497957 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
PTK7-220ENST00000497957 NIPBLQ6KC79 2804 aaeCLIP12.18□□□□□ -0.46
PTK7-220ENST00000497957 SCGB2A1O75556 95 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 STAG3L2P0CL84 134 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 STAG3L3P0CL85 134 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 BLOC1S1P78537 153 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 LURAP1LQ8IV03 231 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 DLX4Q92988 240 aaPredicted RBP12.17□□□□□ -0.46
PTK7-220ENST00000497957 PFDN5Q99471 154 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 RABAC1Q9UI14 185 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 U3KQE9 123 aa12.17□□□□□ -0.46
PTK7-220ENST00000497957 JMJD1CQ15652 2540 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
PTK7-220ENST00000497957 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 ZNF98A6NK75 572 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 OR10J4P0C629 311 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 C8orf88P0DMB2 117 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 RAB14P61106 215 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
PTK7-220ENST00000497957 ADAMTSL5Q6ZMM2 481 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 IQCF2Q8IXL9 164 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 SPATA3Q8NHX4 192 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 DPF1Q92782 380 aa12.16□□□□□ -0.46
PTK7-220ENST00000497957 MRPL32Q9BYC8 188 aaKnown RBP12.16□□□□□ -0.46
PTK7-220ENST00000497957 TMEM213A2RRL7 107 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 CCL24O00175 119 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 MRPS12O15235 138 aaKnown RBP12.15□□□□□ -0.46
PTK7-220ENST00000497957 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
PTK7-220ENST00000497957 GCHFRP30047 84 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 SRSF3P84103 164 aaKnown RBP12.15□□□□□ -0.46
PTK7-220ENST00000497957 SLC7A5P1Q8MH63 180 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 CITED1Q99966 193 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
PTK7-220ENST00000497957 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
PTK7-220ENST00000497957 GP9P14770 177 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 CRYBB3P26998 211 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 FHL3Q13643 280 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 FAM106AQ4KMX7 169 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 RNF2Q99496 336 aa12.14□□□□□ -0.47
PTK7-220ENST00000497957 FBN1P35555 2871 aaKnown RBP12.13□□□□□ -0.47
PTK7-220ENST00000497957 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
PTK7-220ENST00000497957 IGHV7-4-1A0A0J9YVY3 117 aa12.13□□□□□ -0.47
PTK7-220ENST00000497957 H3BQ15 152 aa12.13□□□□□ -0.47
PTK7-220ENST00000497957 OR7C2O60412 319 aa12.13□□□□□ -0.47
PTK7-220ENST00000497957 NPPCP23582 126 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms