RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 WDR55Q9H6Y2 383 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 POPDC3Q9HBV1 291 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 OR2S2Q9NQN1 319 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 C8orf17Q9NRJ1 99 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 TMEM38BQ9NVV0 291 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 MRPL16Q9NX20 251 aaKnown RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 FAM206AQ9NX38 181 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 FKBP11Q9NYL4 201 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CACFD1Q9UGQ2 172 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 TNFSF18Q9UNG2 199 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 HES2Q9Y543 173 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 RFNGQ9Y644 331 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 CHD5Q8TDI0 1954 aa1.46□□□□□ -2.18
CBX3-208ENST00000497498 COL27A1Q8IZC6 1860 aaPredicted RBP1.46□□□□□ -2.18
CBX3-208ENST00000497498 FRAS1Q86XX4 4008 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 EML5Q05BV3 1969 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 C2orf16Q68DN1 1984 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 POLEQ07864 2286 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 IGKV1-27A0A075B6S5 117 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TRAV9-1A0A075B6T8 112 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TRAV1-2A0A0B4J238 106 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 A0A1W2PRS3 328 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 IGSF23A1L1A6 192 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TMEM235A6NFC5 223 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TLCD2A6NGC4 264 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 ZNF705FA8MVS1 300 aaPredicted RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 UMAD1C9J7I0 102 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 E7EQ34 232 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 LGALS9O00182 355 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 MANBAO00462 879 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 AZIN1O14977 448 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 EEF1E1O43324 174 aaKnown RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 SLC16A7O60669 478 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BKO60814 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 YIF1AO95070 293 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 CDS2O95674 445 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 SOD1P00441 154 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 PTHP01270 115 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 IFNA1P01562 189 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 C1QAP02745 245 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 CATP04040 527 aaKnown RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 ISG15P05161 165 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 SERPINA7P05543 415 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BJP06899 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 CTSLP07711 333 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 SLC35G6P0C7Q6 338 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 SEC11BP0C7V7 166 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 LINC00032P0C843 101 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 ZNF705DP0CH99 300 aaPredicted RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 ZNF705BP0CI00 300 aaPredicted RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 MPC1LP0DKB6 136 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 CD28P10747 220 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 LIPCP11150 499 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 PTHLHP12272 177 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 AKR1C4P17516 323 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 ADCYAP1P18509 176 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 CXCL3P19876 107 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 PMCHP20382 165 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 RPS4Y1P22090 263 aaKnown RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H1TP22492 207 aaPredicted RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BOP23527 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 ADORA1P30542 326 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BBP33778 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 KDELR2P33947 212 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 ARL2P36404 184 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 POLR2JP52435 117 aaKnown RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 CRYBA4P53673 196 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 GFERP55789 205 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 OR12D2P58182 307 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 MLF1P58340 268 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BDP58876 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TAS2R41P59536 307 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TAS2R30P59541 319 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H2BCP62807 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 SEC11AP67812 179 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 RUNX1Q01196 453 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TMEM267Q0VDI3 215 aaPredicted RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 ADIRFQ15847 76 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 SSX1Q16384 188 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST2H2BEQ16778 126 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 LTC4SQ16873 150 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 RPEL1Q2QD12 228 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TMEM128Q5BJH2 165 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 RNASE13Q5GAN3 156 aaKnown RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 UBE2NLQ5JXB2 153 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.45□□□□□ -2.18
CBX3-208ENST00000497498 SYPL2Q5VXT5 272 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 TMEM42Q69YG0 159 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 LAIR2Q6ISS4 152 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 AGTRAPQ6RW13 159 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 DPPA3Q6W0C5 159 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 Q6ZSR6 202 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 OLIG3Q7RTU3 272 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 NEGR1Q7Z3B1 354 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 MDP1Q86V88 176 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 FAM24BQ8N5W8 94 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 CYB561A3Q8NBI2 242 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 OR4K17Q8NGC6 315 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 OR2Y1Q8NGV0 311 aa1.45□□□□□ -2.18
CBX3-208ENST00000497498 OR10X1Q8NGY0 326 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms