RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 ADMP35318 185 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 RPL29P47914 159 aaKnown RBP6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 B2MP61769 119 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 KLF5Q13887 457 aaPredicted RBP6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 VWC2Q2TAL6 325 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 TM4SF20Q53R12 229 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 C10orf113Q5VZT2 155 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 FAM122CQ6P4D5 195 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 GPHB5Q86YW7 130 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 DYNLRB2Q8TF09 96 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 NARS2Q96I59 477 aaKnown RBP6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 ATP6V0BQ99437 205 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 GINS3Q9BRX5 216 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 SH3BGRL3Q9H299 93 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 PFDN2Q9UHV9 154 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 RABAC1Q9UI14 185 aa6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 ZNF256Q9Y2P7 627 aaPredicted RBP6.24□□□□□ -1.41
SMARCD3-215ENST00000496530 NDUFA4O00483 81 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 CFDP00746 253 aaPredicted RBP6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 S100A7P31151 101 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 ALKAL2Q6UX46 152 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 S100A7AQ86SG5 101 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 STPG3Q8N7X2 389 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 OR1L4Q8NGR5 311 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 TMED6Q8WW62 240 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 ST8SIA2Q92186 375 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 METTL26Q96S19 204 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 GGTLC1Q9BX51 225 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 SLC25A22Q9H936 323 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 HIGD1AQ9Y241 93 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 UFC1Q9Y3C8 167 aa6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 LSM4Q9Y4Z0 139 aaKnown RBP6.23□□□□□ -1.41
SMARCD3-215ENST00000496530 IGKV3-7A0A075B6H7 116 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 TRAV5A0A0B4J249 113 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 A0A1B0GV50 99 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 WI2-2373I1.2A0A1W2PRP0 233 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 ZNF785A8K8V0 405 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 LGALS9O00182 355 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 HMGB3O15347 200 aaKnown RBP6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 EIF3GO75821 320 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 MBP02144 154 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 SNRPCP09234 159 aaKnown RBP6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 SERF2P84101 59 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 GCSAMLQ5JQS6 135 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 FAM78BQ5VT40 261 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 LCN12Q6JVE5 192 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 UNQ9165/PRO28630Q6UXU0 137 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 GTSCR1Q86UQ5 136 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 IQCF2Q8IXL9 164 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 OR2K2Q8NGT1 345 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 FAM213BQ8TBF2 198 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 RNF125Q96EQ8 232 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 ACTR3CQ9C0K3 210 aaPredicted RBP6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 VSIRQ9H7M9 311 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 KCNIP2Q9NS61 270 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 SIGLEC8Q9NYZ4 499 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 TIMM9Q9Y5J7 89 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 TRRAPQ9Y4A5 3859 aa6.22□□□□□ -1.41
SMARCD3-215ENST00000496530 ELOA3CA0A087WX78 387 aaPredicted RBP6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 A0A1W2PS18 150 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 APOHP02749 345 aaPredicted RBP6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 SEC11BP0C7V7 166 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 SPP1P10451 314 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 GP9P14770 177 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 M6PRP20645 277 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 RAB2AP61019 212 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 RHOBP62745 196 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 TMEM41BQ5BJD5 291 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 LEMD1Q68G75 181 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 PATE2Q6UY27 113 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 LINC00305Q7Z4B0 112 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 OR8I2Q8N0Y5 310 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 LRRC20Q8TCA0 184 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 GRAMD2BQ96HH9 432 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 UHRF2Q96PU4 802 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 PFDN5Q99471 154 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 ARV1Q9H2C2 271 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 TECRQ9NZ01 308 aaKnown RBP6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 MRPL27Q9P0M9 148 aaKnown RBP6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 SMAD5-AS1Q9Y6J3 95 aa6.21□□□□□ -1.42
SMARCD3-215ENST00000496530 WNK1Q9H4A3 2382 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 K7EIL1 84 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 K7EMT4 169 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 DNASE2O00115 360 aaPredicted RBP6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 IFNA7P01567 189 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 IGLV1-51P01701 117 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 FOLR2P14207 255 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 CBLN1P23435 193 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 BMI1P35226 326 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 PRR20EP86478 221 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 PRR20CP86479 221 aa6.2□□□□□ -1.42
SMARCD3-215ENST00000496530 PRR20DP86480 221 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms