RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TEX46H3BTG2 121 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 J3QLW9 94 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 RS1O15537 224 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 CD2P06729 351 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 FABP1P07148 127 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 ZNF19P17023 458 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 S100PP25815 95 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 BTCP35070 178 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 GBGT1Q8N5D6 347 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 OR52I1Q8NGK6 324 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 OR5AK2Q8NH90 309 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 SEC22CQ9BRL7 303 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 NKX6-2Q9C056 277 aaPredicted RBP6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 SELENOIQ9C0D9 397 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 SLC2A9Q9NRM0 540 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 OR1A1Q9P1Q5 309 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 FLVCR2Q9UPI3 526 aa6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
SMARCAL1-213ENST00000496037 DAPL1A0PJW8 107 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 ZNF207O43670 478 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 GSTZ1O43708 216 aaPredicted RBP6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 PDCD6O75340 191 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 IFNA5P01569 189 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 CXCL3P19876 107 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 DEFB131AP59861 70 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 PLP1P60201 277 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 FABP5Q01469 135 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 ZNF415Q09FC8 603 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 MEF2DQ14814 521 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 TTC32Q5I0X7 151 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 MOB1BQ7L9L4 216 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 TOMM5Q8N4H5 51 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 PDCD1LG2Q9BQ51 273 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 BANF2Q9H503 90 aa6.77□□□□□ -1.33
SMARCAL1-213ENST00000496037 LRP2P98164 4655 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 IGHV3OR16-8A0A075B7F1 116 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 TEX48A0A1B0GUV7 120 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 G3V3Q6 166 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 K7EMT4 169 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 SULT1C2O00338 296 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 NDUFA4O00483 81 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 NUPL2O15504 423 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 APOC3P02656 99 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 IL5P05113 134 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 UBBP0CG47 229 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 SAA1P0DJI8 122 aaPredicted RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 NQO2P16083 231 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 MGMTP16455 207 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 ELK1P19419 428 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 S100A11P31949 105 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 NKX2-1P43699 371 aaPredicted RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 EMP1P54849 157 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 TRAM1Q15629 374 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 HES5Q5TA89 166 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 AWAT2Q6E213 333 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 GLIPR1L1Q6UWM5 242 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 Q75L30 129 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 STX12Q86Y82 276 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 SPAG16Q8N0X2 631 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 C12orf45Q8N5I9 185 aaPredicted RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 COQ8AQ8NI60 647 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 OSR1Q8TAX0 266 aaPredicted RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 ZNF502Q8TBZ5 544 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 PCNPQ8WW12 178 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 TMEM203Q969S6 136 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 PTX4Q96A99 478 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 MRPL48Q96GC5 212 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 NARS2Q96I59 477 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 CYYR1Q96J86 154 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 EXOGQ9Y2C4 368 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 FAT3Q8TDW7 4589 aa6.76□□□□□ -1.33
SMARCAL1-213ENST00000496037 IGLV11-55A0A075B6I3 123 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 OR2T8A6NH00 312 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 FBLL1A6NHQ2 334 aaKnown RBP6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 FAM74A7A6NL05 159 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 SNRPGP15A8MWD9 76 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 FCER2P06734 321 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 CXCL2P19875 107 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 PVALBP20472 110 aaPredicted RBP6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 RPL27AP46776 148 aaKnown RBP6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 CCL18P55774 89 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 AP3S2P59780 193 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 GSG1LQ6UXU4 331 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 TMUB2Q71RG4 321 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 SVBPQ8N300 66 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 DMBX1Q8NFW5 382 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 SFT2D1Q8WV19 159 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 NIPSNAP3BQ9BS92 247 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 OR2D2Q9H210 308 aa6.75□□□□□ -1.33
SMARCAL1-213ENST00000496037 OR51M1Q9H341 326 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms