RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PPP1R1CQ8WVI7 109 aa7.31□□□□□ -1.24
CALD1-223ENST00000496024 MED28Q9H204 178 aa7.31□□□□□ -1.24
CALD1-223ENST00000496024 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
CALD1-223ENST00000496024 UBE2L5PA0A1B0GUS4 154 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 E5RGE8 158 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 FNDC10F2Z333 226 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 CFDP00746 253 aaPredicted RBP7.3□□□□□ -1.24
CALD1-223ENST00000496024 OR5G3P0C626 314 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 ZNF688P0C7X2 276 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 LINC00869P0C866 280 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 RPL35AP18077 110 aaKnown RBP7.3□□□□□ -1.24
CALD1-223ENST00000496024 CXCL3P19876 107 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 NUP62P37198 522 aaPredicted RBP7.3□□□□□ -1.24
CALD1-223ENST00000496024 DEFB131AP59861 70 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 HBG1P69891 147 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 HBG2P69892 147 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 NHLH2Q02577 135 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 FCN2Q15485 313 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 LEMD1Q68G75 181 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 SIGLEC15Q6ZMC9 328 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 OR8I2Q8N0Y5 310 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 RCHY1Q96PM5 261 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 TMEM147Q9BVK8 224 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 GGACTQ9BVM4 153 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 ARL6Q9H0F7 186 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 SLC25A22Q9H936 323 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 MAP6D1Q9H9H5 199 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 RETNQ9HD89 108 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 U3KQK5 164 aa7.3□□□□□ -1.24
CALD1-223ENST00000496024 LOC102724200A0A096LPH7 203 aaPredicted RBP7.29□□□□□ -1.24
CALD1-223ENST00000496024 K7EQG2 157 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 AGPAT2O15120 278 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 HYPMO75409 117 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 MPC2O95563 127 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 S100A11P31949 105 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 AP2S1P53680 142 aaPredicted RBP7.29□□□□□ -1.24
CALD1-223ENST00000496024 CMC4P56277 68 aaPredicted RBP7.29□□□□□ -1.24
CALD1-223ENST00000496024 RAP2BP61225 183 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 SELENOTP62341 195 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 EWSR1Q01844 656 aaKnown RBP eCLIP7.29□□□□□ -1.24
CALD1-223ENST00000496024 BAXQ07812 192 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 RAB31Q13636 194 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 MGST2Q99735 147 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 RNF126Q9BV68 326 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 GGTLC1Q9BX51 225 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 SLC25A31Q9H0C2 315 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 UQCC1Q9NVA1 299 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 DNAH7Q8WXX0 4024 aa7.29□□□□□ -1.24
CALD1-223ENST00000496024 ZNF98A6NK75 572 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 FGF7P21781 194 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 CAMLGP49069 296 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 CLINT1Q14677 625 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 LINC00322Q6ZN03 302 aaPredicted RBP7.28□□□□□ -1.24
CALD1-223ENST00000496024 ZNF546Q86UE3 836 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 OR11H7Q8NGC8 314 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 OR5C1Q8NGR4 320 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 UHRF2Q96PU4 802 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 FAM110AQ9BQ89 295 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 SPATA25Q9BR10 227 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 TM2D3Q9BRN9 247 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 SCRT1Q9BWW7 348 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 NRN1Q9NPD7 142 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 MBD2Q9UBB5 411 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 FBXL17Q9UF56 701 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 SLC45A2Q9UMX9 530 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 HIGD1AQ9Y241 93 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 WDR83OSQ9Y284 106 aa7.28□□□□□ -1.24
CALD1-223ENST00000496024 TRAV2A0A0B4J234 112 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 PET100P0DJ07 73 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 OXA1LQ15070 435 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 ATP6V1FQ16864 119 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 C1orf194Q5T5A4 169 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 MIC13Q5XKP0 118 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 THAP6Q8TBB0 222 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 DCANP1Q8TF63 244 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 LINC00052Q96N35 136 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 RSG1Q9BU20 258 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 SLC25A39Q9BZJ4 359 aaPredicted RBP7.27□□□□□ -1.25
CALD1-223ENST00000496024 SMIM3Q9BZL3 60 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 ARV1Q9H2C2 271 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 SLC25A32Q9H2D1 315 aa7.27□□□□□ -1.25
CALD1-223ENST00000496024 H3BRN7 92 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 RPL12P30050 165 aaKnown RBP7.26□□□□□ -1.25
CALD1-223ENST00000496024 S100A7P31151 101 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 GALR1P47211 349 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 APOC4P55056 127 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 FGL1Q08830 312 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 PATE2Q6UY27 113 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 SHANK2-AS3Q9BTD1 123 aa7.26□□□□□ -1.25
CALD1-223ENST00000496024 SNRPCP09234 159 aaKnown RBP7.25□□□□□ -1.25
CALD1-223ENST00000496024 DEFB1P60022 68 aa7.25□□□□□ -1.25
CALD1-223ENST00000496024 PLP1P60201 277 aa7.25□□□□□ -1.25
CALD1-223ENST00000496024 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
CALD1-223ENST00000496024 DEFB135Q30KP9 77 aa7.25□□□□□ -1.25
CALD1-223ENST00000496024 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms