RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 NEU1Q99519 415 aa13.23□□□□□ -0.29
CLCNKA-207ENST00000495784 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 ZNF705FA8MVS1 300 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 SOCS3O14543 225 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 ZNF705DP0CH99 300 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 ZNF705BP0CI00 300 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 RPP30P78346 268 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 SPATA31B1PQ5VZV4 182 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 SLC25A21Q9BQT8 299 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 NDUFAF3Q9BU61 184 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 TMED3Q9Y3Q3 217 aa13.22□□□□□ -0.29
CLCNKA-207ENST00000495784 ISLRO14498 428 aa13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 CFDP00746 253 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 GGNBP1Q5YKI7 109 aa13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 THAP8Q8NA92 274 aa13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 CLUHP3Q96NS8 147 aa13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 MAGT1Q9H0U3 335 aa13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 RFNGQ9Y644 331 aa13.21□□□□□ -0.29
CLCNKA-207ENST00000495784 IGKV1OR2-108A0A075B7D4 117 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 WRBO00258 174 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 SYNGR2O43760 224 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 SFT2D2O95562 160 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 P0DMU3 169 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 FAM231AP0DMU4 169 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 FAM231CP0DMU5 169 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 S100A5P33763 92 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 GALR1P47211 349 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 MEOX2P50222 304 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 GSG1LQ6UXU4 331 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 ZNF709Q8N972 641 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 GOLT1BQ9Y3E0 138 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 V9GYH0 126 aa13.2□□□□□ -0.3
CLCNKA-207ENST00000495784 HOXB5P09067 269 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 PSG9Q00887 426 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 ZNF79Q15937 498 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 DEDD2Q8WXF8 326 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 C16orf92Q96LL3 132 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 SLC35B3Q9H1N7 401 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
CLCNKA-207ENST00000495784 F6UB75 175 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 PAX9P55771 341 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 AKR1C1Q04828 323 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 FAM78BQ5VT40 261 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 BPIFCQ8NFQ6 507 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 C7orf50Q9BRJ6 194 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 SLC25A32Q9H2D1 315 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 SLC45A2Q9UMX9 530 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 HECTD4Q9Y4D8 3996 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 HERC2O95714 4834 aa13.18□□□□□ -0.3
CLCNKA-207ENST00000495784 TEX48A0A1B0GUV7 120 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 CCDC160A6NGH7 325 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 ZNF98A6NK75 572 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 H3BP45 60 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 HBE1P02100 147 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 ORM2P19652 201 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 S100A7P31151 101 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 LINC00336Q6ZUF6 198 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 TMEM147Q9BVK8 224 aa13.17□□□□□ -0.3
CLCNKA-207ENST00000495784 A0A0J9YX75 114 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 PRSS46E5RG02 174 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 NIPSNAP3BQ9BS92 247 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 DOK5Q9P104 306 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 DKK2Q9UBU2 259 aa13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
CLCNKA-207ENST00000495784 GATA2P23769 480 aaPredicted RBP13.15□□□□□ -0.3
CLCNKA-207ENST00000495784 ACOT7LQ6ZUV0 252 aa13.15□□□□□ -0.3
CLCNKA-207ENST00000495784 OR4D5Q8NGN0 318 aa13.15□□□□□ -0.3
CLCNKA-207ENST00000495784 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
CLCNKA-207ENST00000495784 LOC102723971A0A1B0GUV8 181 aa13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 UBE2MP61081 183 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 RRN3P1Q2M238 152 aa13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 C1orf158Q8N1D5 194 aa13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 FAM210BQ96KR6 192 aa13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 GPR82Q96P67 336 aa13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 TMEM208Q9BTX3 173 aa13.14□□□□□ -0.31
CLCNKA-207ENST00000495784 SMCO3A2RU48 225 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 HTN3P15516 51 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 INPP1P49441 399 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 CCDC190Q86UF4 302 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 UBE2DNLQ8IWF7 75 aa13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 YTHDF2Q9Y5A9 579 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-207ENST00000495784 M0R2N4 97 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 ADAP1O75689 374 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 IFNA21P01568 189 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 IL5P05113 134 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms