RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FXYD3Q14802 87 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 TNXAQ16473 311 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 PRSS8Q16651 343 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 ECSCRQ19T08 205 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 SPINK9Q5DT21 86 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 NMSQ5H8A3 153 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 ZC2HC1BQ5TFG8 222 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 FAM219AQ8IW50 185 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 OR4A5Q8NH83 315 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 VSTM2AQ8TAG5 236 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 OR4C12Q96R67 309 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 ZNF436Q9C0F3 470 aaPredicted RBP4.81□□□□□ -1.64
VIM-207ENST00000495528 COMMD5Q9GZQ3 224 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 MAGT1Q9H0U3 335 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 FKBP11Q9NYL4 201 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
VIM-207ENST00000495528 CEBPZOSA8MTT3 80 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 SNURFLB1AK76 121 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 WRBO00258 174 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 PITX3O75364 302 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 CCNKO75909 580 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 IGLV1-51P01701 117 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 IGHV3-11P01762 117 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 LGALS1P09382 135 aaKnown RBP4.8□□□□□ -1.64
VIM-207ENST00000495528 TRAPPC2P0DI81 140 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 TRAPPC2BP0DI82 140 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 SLC25A6P12236 298 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 MAS1LP35410 378 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 PAX9P55771 341 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 CYCSP99999 105 aaKnown RBP4.8□□□□□ -1.64
VIM-207ENST00000495528 HAGHQ16775 308 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 Q5BKY6 102 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 C10orf55Q5SWW7 151 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 ZNF562Q6V9R5 426 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 OR10W1Q8NGF6 305 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 OR1L8Q8NGR8 309 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 SPIN2AQ99865 258 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 SPIN2BQ9BPZ2 258 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 RBKSQ9H477 322 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 GSN-AS1Q9NRJ2 163 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 PRNDQ9UKY0 176 aa4.8□□□□□ -1.64
VIM-207ENST00000495528 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
VIM-207ENST00000495528 C15orf61A6NNL5 157 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 SMLR1H3BR10 107 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 SYNGR2O43760 224 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 RLN2P04090 185 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 HSPB1P04792 205 aaKnown RBP4.79□□□□□ -1.64
VIM-207ENST00000495528 PSMB6P28072 239 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
VIM-207ENST00000495528 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
VIM-207ENST00000495528 S100A10P60903 97 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 SPCS3P61009 180 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
VIM-207ENST00000495528 TNFRSF9Q07011 255 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 IL15RAQ13261 267 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 LRRC37A5PQ49AS3 106 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 OR5T1Q8NG75 326 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 OR4D5Q8NGN0 318 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 GRPEL2Q8TAA5 225 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 PPP1R1CQ8WVI7 109 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 FAM103A1Q9BTL3 118 aaKnown RBP4.79□□□□□ -1.64
VIM-207ENST00000495528 RNF126Q9BV68 326 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 NMES1Q9C002 83 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 GFRA4Q9GZZ7 299 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 ENY2Q9NPA8 101 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 NDUFA4L2Q9NRX3 87 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 TMEM14BQ9NUH8 114 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 COA4Q9NYJ1 87 aa4.79□□□□□ -1.64
VIM-207ENST00000495528 FOXA2Q9Y261 457 aaPredicted RBP4.79□□□□□ -1.64
VIM-207ENST00000495528 A0A1B0GW64 132 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 K7EPK0 472 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 L7N2F9 121 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 SSSCA1O60232 199 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 PFDN1O60925 122 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 MED6O75586 246 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 MPC2O95563 127 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 REG1AP05451 166 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 GIPP09681 153 aaPredicted RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 OR13C7P0DN81 318 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 IAPPP10997 89 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 DLK1P80370 383 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 ERHP84090 104 aaKnown RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 CD300CQ08708 224 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 TMEM267Q0VDI3 215 aaPredicted RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 AKAP14Q86UN6 197 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 LFNGQ8NES3 379 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 OR10G8Q8NGN5 311 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 OR2T35Q8NGX2 323 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 OR52E5Q8NH55 327 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 OPRPNQ99935 248 aaPredicted RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 RETNQ9HD89 108 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 PSENENQ9NZ42 101 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 PAIP2BQ9ULR5 123 aaKnown RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 RCL1Q9Y2P8 373 aaKnown RBP4.78□□□□□ -1.64
VIM-207ENST00000495528 ZNF257Q9Y2Q1 563 aa4.78□□□□□ -1.64
VIM-207ENST00000495528 FAM24AA6NFZ4 105 aa4.77□□□□□ -1.65
VIM-207ENST00000495528 IFNA10P01566 189 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms