RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 APLNQ9ULZ1 77 aa11.94□□□□□ -0.5
LMNA-215ENST00000495341 IGHV3OR16-12A0A075B7B8 117 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 IGKV1OR2-108A0A075B7D4 117 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 H3BP45 60 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 PRR20EP86478 221 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 PRR20CP86479 221 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 PRR20DP86480 221 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 PRR20BP86481 221 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 PRR20AP86496 221 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 AKR1C1Q04828 323 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 FOXI2Q6ZQN5 318 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 OR4B1Q8NGF8 309 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 SAV1Q9H4B6 383 aaPredicted RBP11.93□□□□□ -0.5
LMNA-215ENST00000495341 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 VPS13DQ5THJ4 4388 aa11.93□□□□□ -0.5
LMNA-215ENST00000495341 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
LMNA-215ENST00000495341 TRIQKQ629K1 86 aa11.92□□□□□ -0.5
LMNA-215ENST00000495341 STRAPQ9Y3F4 350 aaKnown RBP11.92□□□□□ -0.5
LMNA-215ENST00000495341 DNAH10Q8IVF4 4471 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 PRSS46E5RG02 174 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 SOCS3O14543 225 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 CFDP00746 253 aaPredicted RBP11.91□□□□□ -0.5
LMNA-215ENST00000495341 GALR1P47211 349 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 UBE2MP61081 183 aaKnown RBP11.91□□□□□ -0.5
LMNA-215ENST00000495341 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 BPIFCQ8NFQ6 507 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 C16orf92Q96LL3 132 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
LMNA-215ENST00000495341 RBM38Q9H0Z9 239 aaKnown RBP11.91□□□□□ -0.5
LMNA-215ENST00000495341 DEFB131BA0A096LNP1 70 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 C9orf170A2RU37 121 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 SMCO3A2RU48 225 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 F6UB75 175 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 ISLRO14498 428 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 ADAP1O75689 374 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 ORM2P19652 201 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
LMNA-215ENST00000495341 MEOX2P50222 304 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 EMP1P54849 157 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 C12orf74Q32Q52 190 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 SAMD13Q5VXD3 122 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 ACOT7LQ6ZUV0 252 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 RNF126Q9BV68 326 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
LMNA-215ENST00000495341 LINC00854A0A1B0GVQ3 168 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 NAP1L6A6NFF2 107 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
LMNA-215ENST00000495341 FAM78BQ5VT40 261 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
LMNA-215ENST00000495341 OR1B1Q8NGR6 318 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 NEU1Q99519 415 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 TMEM147Q9BVK8 224 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 SLC35B3Q9H1N7 401 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 RPRMQ9NS64 109 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 SLC45A2Q9UMX9 530 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
LMNA-215ENST00000495341 TMEM189A5PLL7 270 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 ZNF98A6NK75 572 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 ZNF705FA8MVS1 300 aaPredicted RBP11.88□□□□□ -0.51
LMNA-215ENST00000495341 NDUFB6O95139 128 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 IFNA21P01568 189 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 ZNF705DP0CH99 300 aaPredicted RBP11.88□□□□□ -0.51
LMNA-215ENST00000495341 ZNF705BP0CI00 300 aaPredicted RBP11.88□□□□□ -0.51
LMNA-215ENST00000495341 S100A7P31151 101 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 PSG9Q00887 426 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 BAK1Q16611 211 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 ZNF709Q8N972 641 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 C7orf50Q9BRJ6 194 aaKnown RBP11.88□□□□□ -0.51
LMNA-215ENST00000495341 RSG1Q9BU20 258 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 PSENENQ9NZ42 101 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
LMNA-215ENST00000495341 A0A0J9YX75 114 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
LMNA-215ENST00000495341 SSSCA1O60232 199 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 AMBPP02760 352 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 OR4E1P0C645 316 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 SPART-AS1P0CW21 52 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 PAX9P55771 341 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 ID3Q02535 119 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
LMNA-215ENST00000495341 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 DOK5Q9P104 306 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
LMNA-215ENST00000495341 CENPXA8MT69 81 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 FGL1Q08830 312 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 C4orf46Q504U0 113 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 CYP2G1PQ6ZSU1 146 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 TMEM144Q7Z5S9 345 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 C20orf173Q96LM9 149 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 GPR82Q96P67 336 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 NDUFAF3Q9BU61 184 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 DNAH6Q9C0G6 4158 aa11.86□□□□□ -0.51
LMNA-215ENST00000495341 HBE1P02100 147 aa11.85□□□□□ -0.51
LMNA-215ENST00000495341 IL5P05113 134 aa11.85□□□□□ -0.51
LMNA-215ENST00000495341 ANXA7P20073 488 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms