RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 OR51M1Q9H341 326 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
CBX4-204ENST00000495122 IGHV7-81A0A0B4J1V7 117 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 NDUFB4O95168 129 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 TOMM40O96008 361 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 NPPCP23582 126 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 LINC00305Q7Z4B0 112 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 FAM24BQ8N5W8 94 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 VN1R17PQ8TDU5 208 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 RBM14Q96PK6 669 aaKnown RBP12.78□□□□□ -0.36
CBX4-204ENST00000495122 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 ATP6V0BQ99437 205 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
CBX4-204ENST00000495122 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 MOB4Q9Y3A3 225 aa12.78□□□□□ -0.36
CBX4-204ENST00000495122 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 H7BYZ3 331 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 CD24P25063 80 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 S100PP25815 95 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 CRIP2P52943 208 aaPredicted RBP12.77□□□□□ -0.37
CBX4-204ENST00000495122 ELOBQ15370 118 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 ASPHD1Q5U4P2 390 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 C12orf54Q6X4T0 127 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 ISOC2Q96AB3 205 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 OR5B12Q96R08 314 aa12.77□□□□□ -0.37
CBX4-204ENST00000495122 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 M0QZK8 103 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 RD3LP0DJH9 198 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 APELAP0DMC3 54 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 NDPQ00604 133 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 C16orf82Q7Z2V1 217 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 OR1B1Q8NGR6 318 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 FANCD2OSQ96PS1 177 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 PLXNB1O43157 2135 aa12.76□□□□□ -0.37
CBX4-204ENST00000495122 IGKV1-17P01599 117 aa12.75□□□□□ -0.37
CBX4-204ENST00000495122 PSG1P11464 419 aa12.75□□□□□ -0.37
CBX4-204ENST00000495122 TAS2R60P59551 318 aa12.75□□□□□ -0.37
CBX4-204ENST00000495122 ESM1Q9NQ30 184 aa12.75□□□□□ -0.37
CBX4-204ENST00000495122 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
CBX4-204ENST00000495122 C21orf62Q9NYP8 219 aa12.75□□□□□ -0.37
CBX4-204ENST00000495122 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
CBX4-204ENST00000495122 TRAV40A0A0B4J280 105 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 MDFIC2A0A1B0GVS7 189 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 TMEM89A2RUT3 159 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 GNG7O60262 68 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 IGHV3-48P01763 117 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 S100A9P06702 114 aaKnown RBP12.74□□□□□ -0.37
CBX4-204ENST00000495122 EGR2P11161 476 aaPredicted RBP12.74□□□□□ -0.37
CBX4-204ENST00000495122 ORM2P19652 201 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 KCNIP4Q6PIL6 250 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 C19orf35Q6ZS72 473 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 Q8WTZ3 238 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 FXYD5Q96DB9 178 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 FAM103A1Q9BTL3 118 aaKnown RBP12.74□□□□□ -0.37
CBX4-204ENST00000495122 PITPNC1Q9UKF7 332 aa12.74□□□□□ -0.37
CBX4-204ENST00000495122 TRAV9-1A0A075B6T8 112 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 WI2-2373I1.2A0A1W2PRP0 233 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 BRI3O95415 125 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 TIGITQ495A1 244 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 KLF17Q5JT82 389 aaPredicted RBP12.73□□□□□ -0.37
CBX4-204ENST00000495122 C2CD4CQ8TF44 421 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 SMIM12Q96EX1 92 aa12.73□□□□□ -0.37
CBX4-204ENST00000495122 HELTA6NFD8 242 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 PFN1P07737 140 aaKnown RBP12.72□□□□□ -0.37
CBX4-204ENST00000495122 OR10J4P0C629 311 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 GP9P14770 177 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 RPL35P42766 123 aaKnown RBP12.72□□□□□ -0.37
CBX4-204ENST00000495122 LYZP61626 148 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 KIAA0141Q14154 515 aaPredicted RBP12.72□□□□□ -0.37
CBX4-204ENST00000495122 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 ZNF343Q6P1L6 599 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
CBX4-204ENST00000495122 TRBV9A0A0B4J1U6 114 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 H3BRN7 92 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 MYCNOSP40205 109 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 GALR1P47211 349 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 GNG4P50150 75 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
CBX4-204ENST00000495122 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.37
CBX4-204ENST00000495122 RUSC1-AS1Q66K80 236 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 UNQ5815/PRO19632Q6UWF5 114 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 RNF125Q96EQ8 232 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 SFRP2Q96HF1 295 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 SLC25A39Q9BZJ4 359 aaPredicted RBP12.71□□□□□ -0.37
CBX4-204ENST00000495122 ZNF580Q9UK33 172 aa12.71□□□□□ -0.37
CBX4-204ENST00000495122 TRBV20OR9-2A0A075B6H5 130 aa12.7□□□□□ -0.38
CBX4-204ENST00000495122 H3BUA1 57 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms