RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PITX3O75364 302 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 PAX9P55771 341 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 RAB11AP62491 216 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 SAMD13Q5VXD3 122 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 EBLN2Q6P2I7 272 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 OR8I2Q8N0Y5 310 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 PPP1R14BQ96C90 147 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 DKK2Q9UBU2 259 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 TMBIM6P55061 237 aa16.58■□□□□ 0.24
COL27A1-208ENST00000494780 PSG9Q00887 426 aa16.58■□□□□ 0.24
COL27A1-208ENST00000494780 OR2F1Q13607 317 aa16.58■□□□□ 0.24
COL27A1-208ENST00000494780 SOSTQ9BQB4 213 aa16.58■□□□□ 0.24
COL27A1-208ENST00000494780 GOLT1BQ9Y3E0 138 aa16.58■□□□□ 0.24
COL27A1-208ENST00000494780 CFDP00746 253 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-208ENST00000494780 LGALS9BQ3B8N2 356 aa16.57■□□□□ 0.24
COL27A1-208ENST00000494780 THAP8Q8NA92 274 aa16.57■□□□□ 0.24
COL27A1-208ENST00000494780 NIPSNAP3BQ9BS92 247 aa16.57■□□□□ 0.24
COL27A1-208ENST00000494780 SLC35B3Q9H1N7 401 aa16.57■□□□□ 0.24
COL27A1-208ENST00000494780 KIAA1109Q2LD37 5005 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 A0A0J9YX75 114 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 FABP12A6NFH5 140 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 PRSS29PA6NIE9 313 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 IAPPP10997 89 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 SLC25A6P12236 298 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 TNFSF8P32971 234 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 FAUP35544 74 aaKnown RBP16.56■□□□□ 0.24
COL27A1-208ENST00000494780 MEOX2P50222 304 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 FAM222AQ5U5X8 452 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 FAM78BQ5VT40 261 aa16.56■□□□□ 0.24
COL27A1-208ENST00000494780 IGKV1OR2-108A0A075B7D4 117 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 M0R2N4 97 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 RTL8CO15255 209 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 IFNA21P01568 189 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 HBE1P02100 147 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 OXA1LQ15070 435 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 TMEM128Q5BJH2 165 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 GGNBP1Q5YKI7 109 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 LRTM2Q8N967 370 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 SLIRPQ9GZT3 109 aaKnown RBP16.55■□□□□ 0.24
COL27A1-208ENST00000494780 RPRMQ9NS64 109 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 PAIP2BQ9ULR5 123 aaKnown RBP16.55■□□□□ 0.24
COL27A1-208ENST00000494780 SLC45A2Q9UMX9 530 aa16.55■□□□□ 0.24
COL27A1-208ENST00000494780 F6UB75 175 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 MED6O75586 246 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 GALR1P47211 349 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 RPP30P78346 268 aaKnown RBP16.54■□□□□ 0.24
COL27A1-208ENST00000494780 TMED4Q7Z7H5 227 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 UBE2DNLQ8IWF7 75 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 C1orf158Q8N1D5 194 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 C16orf92Q96LL3 132 aa16.54■□□□□ 0.24
COL27A1-208ENST00000494780 CIB3Q96Q77 187 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-208ENST00000494780 C7orf50Q9BRJ6 194 aaKnown RBP16.54■□□□□ 0.24
COL27A1-208ENST00000494780 LOC102723971A0A1B0GUV8 181 aa16.53■□□□□ 0.24
COL27A1-208ENST00000494780 GSG1LQ6UXU4 331 aa16.53■□□□□ 0.24
COL27A1-208ENST00000494780 DOK5Q9P104 306 aa16.53■□□□□ 0.24
COL27A1-208ENST00000494780 FAT2Q9NYQ8 4349 aa16.53■□□□□ 0.24
COL27A1-208ENST00000494780 DNAH17Q9UFH2 4485 aa16.52■□□□□ 0.24
COL27A1-208ENST00000494780 A8MTW9 85 aa16.52■□□□□ 0.24
COL27A1-208ENST00000494780 AP3S2P59780 193 aa16.52■□□□□ 0.24
COL27A1-208ENST00000494780 RRN3P1Q2M238 152 aa16.52■□□□□ 0.24
COL27A1-208ENST00000494780 C20orf173Q96LM9 149 aa16.52■□□□□ 0.24
COL27A1-208ENST00000494780 SLC25A32Q9H2D1 315 aa16.52■□□□□ 0.24
COL27A1-208ENST00000494780 YTHDF2Q9Y5A9 579 aaKnown RBP16.52■□□□□ 0.24
COL27A1-208ENST00000494780 ZNF98A6NK75 572 aa16.51■□□□□ 0.23
COL27A1-208ENST00000494780 PRSS46E5RG02 174 aa16.51■□□□□ 0.23
COL27A1-208ENST00000494780 VAMP1P23763 118 aa16.51■□□□□ 0.23
COL27A1-208ENST00000494780 RSG1Q9BU20 258 aa16.51■□□□□ 0.23
COL27A1-208ENST00000494780 PLA2G2EQ9NZK7 142 aa16.51■□□□□ 0.23
COL27A1-208ENST00000494780 TMED3Q9Y3Q3 217 aa16.51■□□□□ 0.23
COL27A1-208ENST00000494780 DNAH2Q9P225 4427 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 SYNGR2O43760 224 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 NOL3O60936 208 aaKnown RBP16.5■□□□□ 0.23
COL27A1-208ENST00000494780 MED14OSP0DP75 135 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 S100A7P31151 101 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 RNF212Q495C1 297 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 TOMM5Q8N4H5 51 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 BPIFCQ8NFQ6 507 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 OR4D5Q8NGN0 318 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 OR1B1Q8NGR6 318 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 MCFD2Q8NI22 146 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 TRIM63Q969Q1 353 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 IGF2BP2-AS1Q96M15 143 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 C17orf77Q96MU5 243 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 GPR82Q96P67 336 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 SLC25A21Q9BQT8 299 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-208ENST00000494780 MAGT1Q9H0U3 335 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 SLC25A22Q9H936 323 aa16.5■□□□□ 0.23
COL27A1-208ENST00000494780 HTN3P15516 51 aa16.49■□□□□ 0.23
COL27A1-208ENST00000494780 AMTNQ6UX39 209 aa16.49■□□□□ 0.23
COL27A1-208ENST00000494780 Q6ZR54 194 aa16.49■□□□□ 0.23
COL27A1-208ENST00000494780 H3BMQ9 156 aa16.48■□□□□ 0.23
COL27A1-208ENST00000494780 WRBO00258 174 aa16.48■□□□□ 0.23
COL27A1-208ENST00000494780 SFT2D2O95562 160 aa16.48■□□□□ 0.23
COL27A1-208ENST00000494780 DAD1P61803 113 aa16.48■□□□□ 0.23
COL27A1-208ENST00000494780 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.48■□□□□ 0.23
COL27A1-208ENST00000494780 TMEM208Q9BTX3 173 aa16.48■□□□□ 0.23
COL27A1-208ENST00000494780 IGLV2-18A0A075B6J9 118 aa16.47■□□□□ 0.23
COL27A1-208ENST00000494780 ORM2P19652 201 aa16.47■□□□□ 0.23
COL27A1-208ENST00000494780 PYDC2Q56P42 97 aa16.47■□□□□ 0.23
COL27A1-208ENST00000494780 DEDD2Q8WXF8 326 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms