RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SFT2D2O95562 160 aa8.35□□□□□ -1.07
VTI1A-208ENST00000494728 HOXB5P09067 269 aa8.35□□□□□ -1.07
VTI1A-208ENST00000494728 FAUP35544 74 aaKnown RBP8.35□□□□□ -1.07
VTI1A-208ENST00000494728 NKX2-1P43699 371 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-208ENST00000494728 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-208ENST00000494728 TRGV9Q99603 122 aa8.35□□□□□ -1.07
VTI1A-208ENST00000494728 SRRQ9GZT4 340 aa8.35□□□□□ -1.07
VTI1A-208ENST00000494728 SLC35B3Q9H1N7 401 aa8.35□□□□□ -1.07
VTI1A-208ENST00000494728 SLC25A32Q9H2D1 315 aa8.35□□□□□ -1.07
VTI1A-208ENST00000494728 SAV1Q9H4B6 383 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-208ENST00000494728 SEPSECSQ9HD40 501 aaKnown RBP8.35□□□□□ -1.07
VTI1A-208ENST00000494728 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
VTI1A-208ENST00000494728 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 ZNF705FA8MVS1 300 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-208ENST00000494728 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 WRBO00258 174 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 ADAP1O75689 374 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 ZNF705DP0CH99 300 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-208ENST00000494728 ZNF705BP0CI00 300 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-208ENST00000494728 SLC25A6P12236 298 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 GGNBP1Q5YKI7 109 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 LINC00052Q96N35 136 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 FLVCR2Q9UPI3 526 aa8.34□□□□□ -1.07
VTI1A-208ENST00000494728 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.08
VTI1A-208ENST00000494728 SYNGR2O43760 224 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 CCNKO75909 580 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 AMBPP02760 352 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 BTCP35070 178 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 PSMB3P49720 205 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 ATP5IP56385 69 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-208ENST00000494728 TCTAP57738 103 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 AP3S2P59780 193 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 BAK1Q16611 211 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 FOXI2Q6ZQN5 318 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 CENPSQ8N2Z9 138 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 SDHCQ99643 169 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-208ENST00000494728 SLC25A21Q9BQT8 299 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-208ENST00000494728 TMED3Q9Y3Q3 217 aa8.33□□□□□ -1.08
VTI1A-208ENST00000494728 IGHV3OR16-12A0A075B7B8 117 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 DEFB131BA0A096LNP1 70 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 C9orf170A2RU37 121 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 SNRPGP15A8MWD9 76 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 NUP62P37198 522 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-208ENST00000494728 EMP1P54849 157 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 RAB11AP62491 216 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 C1orf194Q5T5A4 169 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 IGFL4Q6B9Z1 124 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 OR4B1Q8NGF8 309 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 COQ8AQ8NI60 647 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 SLC25A22Q9H936 323 aa8.32□□□□□ -1.08
VTI1A-208ENST00000494728 TRAV8-2A0A0B4J237 113 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 A0A0J9YX75 114 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 PMS2P5A8MQ11 134 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 ISLRO14498 428 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 PRB4P10163 310 aaPredicted RBP8.31□□□□□ -1.08
VTI1A-208ENST00000494728 PAX9P55771 341 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
VTI1A-208ENST00000494728 POLR2GP62487 172 aaKnown RBP eCLIP8.31□□□□□ -1.08
VTI1A-208ENST00000494728 SPANXN5Q5MJ07 72 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 FAM78BQ5VT40 261 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 OR8I2Q8N0Y5 310 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 PPP1R14BQ96C90 147 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 NEU1Q99519 415 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 RNF126Q9BV68 326 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 DOK5Q9P104 306 aa8.31□□□□□ -1.08
VTI1A-208ENST00000494728 LINC00854A0A1B0GVQ3 168 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 ZNF98A6NK75 572 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 A8MTW9 85 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 SSSCA1O60232 199 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 MED6O75586 246 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 NDUFB6O95139 128 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 PRM2P04554 102 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 ORM2P19652 201 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 S100A5P33763 92 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 UBE2MP61081 183 aaKnown RBP8.3□□□□□ -1.08
VTI1A-208ENST00000494728 ID3Q02535 119 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 AKR1C1Q04828 323 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 RNF182Q8N6D2 247 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 OR4D5Q8NGN0 318 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 DEDD2Q8WXF8 326 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 CIB3Q96Q77 187 aaPredicted RBP8.3□□□□□ -1.08
VTI1A-208ENST00000494728 RYR1P21817 5038 aa8.3□□□□□ -1.08
VTI1A-208ENST00000494728 H3BRN7 92 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 FABP1P07148 127 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 ANXA7P20073 488 aaKnown RBP8.29□□□□□ -1.08
VTI1A-208ENST00000494728 ID1P41134 155 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 PSG9Q00887 426 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 OR1B1Q8NGR6 318 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 C16orf92Q96LL3 132 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 RSG1Q9BU20 258 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
VTI1A-208ENST00000494728 STRAPQ9Y3F4 350 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms