RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 MS4A6AQ9H2W1 248 aa5.94□□□□□ -1.46
RIF1-211ENST00000494333 TMEM231Q9H6L2 316 aa5.94□□□□□ -1.46
RIF1-211ENST00000494333 SHPKQ9UHJ6 478 aa5.94□□□□□ -1.46
RIF1-211ENST00000494333 TP53TG1Q9Y2A0 90 aa5.94□□□□□ -1.46
RIF1-211ENST00000494333 V9GYH0 126 aa5.94□□□□□ -1.46
RIF1-211ENST00000494333 IGLC1P0CG04 106 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 NPY1RP25929 384 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 CRYBB3P26998 211 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 OR10J1P30954 320 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 DEFB131AP59861 70 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 TNFRSF9Q07011 255 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 SMCO1Q147U7 214 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 ZNF79Q15937 498 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 TMEM128Q5BJH2 165 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 LYG2Q86SG7 212 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 NOXA1Q86UR1 476 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 OR1S1Q8NH92 325 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 DTD1Q8TEA8 209 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 TMEM170AQ8WVE7 144 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 RNF183Q96D59 192 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 NARS2Q96I59 477 aaKnown RBP5.93□□□□□ -1.46
RIF1-211ENST00000494333 RBKSQ9H477 322 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 HSPB7Q9UBY9 170 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 RABAC1Q9UI14 185 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 U3KQ87 197 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 TENM2Q9NT68 2774 aa5.93□□□□□ -1.46
RIF1-211ENST00000494333 PIGBOS1A0A0B4J2F0 54 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 MPTX1A8MV57 137 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 IFNA4P05014 189 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 IL4P05112 153 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 P2RY1P47900 373 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 YPEL3P61236 119 aaPredicted RBP5.92□□□□□ -1.46
RIF1-211ENST00000494333 SRPXP78539 464 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 EWSR1Q01844 656 aaKnown RBP eCLIP5.92□□□□□ -1.46
RIF1-211ENST00000494333 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 CCDC190Q86UF4 302 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 FAM24BQ8N5W8 94 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 STXBP6Q8NFX7 210 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 OR1S2Q8NGQ3 325 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 ACY3Q96HD9 319 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 GRAMD2BQ96HH9 432 aa5.92□□□□□ -1.46
RIF1-211ENST00000494333 SLC25A21Q9BQT8 299 aaPredicted RBP5.92□□□□□ -1.46
RIF1-211ENST00000494333 RBM38Q9H0Z9 239 aaKnown RBP5.92□□□□□ -1.46
RIF1-211ENST00000494333 TRAV2A0A0B4J234 112 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 GAGE12JA6NER3 117 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 K7EQG2 157 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 TOMM40O96008 361 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 RD3LP0DJH9 198 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 SPANXN2Q5MJ10 180 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
RIF1-211ENST00000494333 DEDD2Q8WXF8 326 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 RARRES2Q99969 163 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
RIF1-211ENST00000494333 DUXBA0A1W2PPF3 345 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 HELTA6NFD8 242 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 ZNF701M0R085 212 aaPredicted RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 PITX3O75364 302 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 SFT2D2O95562 160 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 CA1P00915 261 aaPredicted RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 HOXB5P09067 269 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 ZNF688P0C7X2 276 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 INPP1P49441 399 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 EIF2B2P49770 351 aaKnown RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 AP2S1P53680 142 aaPredicted RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 ATP5IP56385 69 aaPredicted RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 PPP1R1AQ13522 171 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 GAMTQ14353 236 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 USF2Q15853 346 aaPredicted RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 BAK1Q16611 211 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 C16orf54Q6UWD8 224 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 STHQ8IWL8 128 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 CENPSQ8N2Z9 138 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 LRTM2Q8N967 370 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 DCANP1Q8TF63 244 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 GATAD1Q8WUU5 269 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 SRRQ9GZT4 340 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 PAIP2BQ9ULR5 123 aaKnown RBP5.9□□□□□ -1.46
RIF1-211ENST00000494333 TMED3Q9Y3Q3 217 aa5.9□□□□□ -1.46
RIF1-211ENST00000494333 LINC00854A0A1B0GVQ3 168 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 ZFP92A6NM28 416 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 KNCNA6PVL3 124 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 WRBO00258 174 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 BUB3O43684 328 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 IAPPP10997 89 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 SLC25A6P12236 298 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 GPX4P36969 197 aaPredicted RBP5.89□□□□□ -1.47
RIF1-211ENST00000494333 RAB11AP62491 216 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 ZNF90Q03938 601 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 DHRS2Q13268 280 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 OR51G1Q8NGK1 321 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 OR11H2Q8NH07 326 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 SLC35E1Q96K37 410 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 PBDC1Q9BVG4 233 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 MAGT1Q9H0U3 335 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 RYR3Q15413 4870 aa5.89□□□□□ -1.47
RIF1-211ENST00000494333 IGKV1D-37A0A075B6S9 117 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 C9orf170A2RU37 121 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 NUPR2A6NF83 97 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 NAP1L6A6NFF2 107 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 SNRPGP15A8MWD9 76 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms