RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 UNQ9165/PRO28630Q6UXU0 137 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 OR11H1Q8NG94 326 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 OR1N2Q8NGR9 330 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 LRRC20Q8TCA0 184 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
MCF2L-231ENST00000494043 RAX2Q96IS3 184 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 UHRF2Q96PU4 802 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 RNF2Q99496 336 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 MRPL32Q9BYC8 188 aaKnown RBP8.74□□□□□ -1.01
MCF2L-231ENST00000494043 ACTR3CQ9C0K3 210 aaPredicted RBP8.74□□□□□ -1.01
MCF2L-231ENST00000494043 SLC25A22Q9H936 323 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 SEPSECSQ9HD40 501 aaKnown RBP8.74□□□□□ -1.01
MCF2L-231ENST00000494043 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
MCF2L-231ENST00000494043 CTXND1A0A1B0GTU2 59 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 A0A1W2PPV4 95 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 H3BRN7 92 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 NMBP08949 121 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 RAB14P61106 215 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 BLOC1S1P78537 153 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 FHL3Q13643 280 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 NSUN5P1Q3KNT7 163 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 SPATA31B1PQ5VZV4 182 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 MIR17HGQ75NE6 70 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 LINC00305Q7Z4B0 112 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 REC114Q7Z4M0 266 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 S100A7AQ86SG5 101 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 PCNPQ8WW12 178 aaKnown RBP8.73□□□□□ -1.01
MCF2L-231ENST00000494043 TMEM158Q8WZ71 300 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 DPF1Q92782 380 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 DUX3Q96PT4 197 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 CITED1Q99966 193 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 C20orf24Q9BUV8 137 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 SLC25A39Q9BZJ4 359 aaPredicted RBP8.73□□□□□ -1.01
MCF2L-231ENST00000494043 RABAC1Q9UI14 185 aa8.73□□□□□ -1.01
MCF2L-231ENST00000494043 ZNF320A2RRD8 509 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 MAP1LC3B2A6NCE7 125 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 CCL24O00175 119 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 LGALS9O00182 355 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
MCF2L-231ENST00000494043 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 SLURP1P55000 103 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-231ENST00000494043 MORN5Q5VZ52 161 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 C1QL4Q86Z23 238 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 RAB24Q969Q5 203 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 METTL26Q96S19 204 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 SHANK2-AS3Q9BTD1 123 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 MAP1LC3BQ9GZQ8 125 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 UFC1Q9Y3C8 167 aa8.72□□□□□ -1.01
MCF2L-231ENST00000494043 A8MWP6 167 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 HMGB3O15347 200 aaKnown RBP8.71□□□□□ -1.02
MCF2L-231ENST00000494043 ZNF207O43670 478 aaKnown RBP8.71□□□□□ -1.02
MCF2L-231ENST00000494043 C8orf88P0DMB2 117 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 NPPCP23582 126 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 CRYBB3P26998 211 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 S100A7P31151 101 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 RIPPLY3P57055 190 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 SYNJ2BPP57105 145 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 TAS2R45P59539 299 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 CLLU1Q5K131 121 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 LCN15Q6UWW0 184 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 SFT2D1Q8WV19 159 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 SCRT1Q9BWW7 348 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
MCF2L-231ENST00000494043 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.02
MCF2L-231ENST00000494043 TECRQ9NZ01 308 aaKnown RBP8.71□□□□□ -1.02
MCF2L-231ENST00000494043 TRAV1-1A0A0B4J248 108 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 TRAV5A0A0B4J249 113 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 ZNF98A6NK75 572 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 K7EMT4 169 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 STAG3L2P0CL84 134 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 STAG3L3P0CL85 134 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 MYCNOSP40205 109 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 KHDC3LQ587J8 217 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 LEMD1Q68G75 181 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 FAM167A-AS1Q96KT0 104 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 PFDN2Q9UHV9 154 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 RNF24Q9Y225 148 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 U3KQE9 123 aa8.7□□□□□ -1.02
MCF2L-231ENST00000494043 A0A1B0GV50 99 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 TMEM213A2RRL7 107 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 TEX46H3BTG2 121 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 CXorf1O96002 111 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 HBE1P02100 147 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 APOHP02749 345 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-231ENST00000494043 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 FGF8P55075 233 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-231ENST00000494043 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 DLX4Q92988 240 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-231ENST00000494043 NARS2Q96I59 477 aaKnown RBP8.69□□□□□ -1.02
MCF2L-231ENST00000494043 ZNF747Q9BV97 191 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 HRH4Q9H3N8 390 aa8.69□□□□□ -1.02
MCF2L-231ENST00000494043 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
MCF2L-231ENST00000494043 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms