RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TSPAN4O14817 238 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 LINC00869P0C866 280 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 TFPI2P48307 235 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 SELENOTP62341 195 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
CTSA-209ENST00000493522 ATP6V1FQ16864 119 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 TMEM182Q6ZP80 229 aaPredicted RBP8.69□□□□□ -1.02
CTSA-209ENST00000493522 ZNF546Q86UE3 836 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 OR1B1Q8NGR6 318 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 MUC7Q8TAX7 377 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 MGST2Q99735 147 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
CTSA-209ENST00000493522 NEURL2Q9BR09 285 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 PFDN2Q9UHV9 154 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
CTSA-209ENST00000493522 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 AGPAT2O15120 278 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 DFFBO76075 338 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 CD5P06127 495 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 CD7P09564 240 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 LYL1P12980 280 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 ORM2P19652 201 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 FGF7P21781 194 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 RPL12P30050 165 aaKnown RBP8.68□□□□□ -1.02
CTSA-209ENST00000493522 CAMLGP49069 296 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 FGL1Q08830 312 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 RAB31Q13636 194 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 VWC2Q2TAL6 325 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 CASC10Q5T4H9 136 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 GBGT1Q8N5D6 347 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 STXBP6Q8NFX7 210 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 SMIM3Q9BZL3 60 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 SMAD5-AS1Q9Y6J3 95 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 U3KQE9 123 aa8.68□□□□□ -1.02
CTSA-209ENST00000493522 TENM2Q9NT68 2774 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 HELTA6NFD8 242 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 OR5G3P0C626 314 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 FAM90A2PQ658T7 463 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 C16orf54Q6UWD8 224 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 OR2T35Q8NGX2 323 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 GLMPQ8WWB7 406 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 GGTLC1Q9BX51 225 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 ARL6Q9H0F7 186 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 WFDC10AQ9H1F0 79 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 HIGD1AQ9Y241 93 aa8.67□□□□□ -1.02
CTSA-209ENST00000493522 FXYD6-FXYD2A0A087WZ82 144 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 DNASE2O00115 360 aaPredicted RBP8.66□□□□□ -1.02
CTSA-209ENST00000493522 BUB3O43684 328 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 HYPMO75409 117 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 S100A7P31151 101 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 OPCMLQ14982 345 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 MIC13Q5XKP0 118 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 SIGLEC15Q6ZMC9 328 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 WFDC3Q8IUB2 231 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 Q8N1Y9 231 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 STPG3Q8N7X2 389 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 ATP5SQ99766 215 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 MS4A6AQ9H2W1 248 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 SLC25A22Q9H936 323 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 UBQLN2Q9UHD9 624 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
CTSA-209ENST00000493522 CSMD3Q7Z407 3707 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 OR11H12B2RN74 326 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 COX7A2P2O60397 106 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 MPDU1O75352 247 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 IGHV4-30-4P0DP06 118 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 Q5BKY6 102 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 OR8I2Q8N0Y5 310 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 SCRT1Q9BWW7 348 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 NPCDR1Q9BY65 106 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 TUBA4BQ9H853 241 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 FBXL17Q9UF56 701 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.02
CTSA-209ENST00000493522 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 H3BRN7 92 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 IFNA5P01569 189 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 FRMD6-AS1P0C7T7 363 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 AP2S1P53680 142 aaPredicted RBP8.64□□□□□ -1.03
CTSA-209ENST00000493522 PLP1P60201 277 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 ODF3L2Q3SX64 289 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 PXDC1Q5TGL8 231 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 ZNF709Q8N972 641 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 CHAC2Q8WUX2 184 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 UHRF2Q96PU4 802 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 SHANK2-AS3Q9BTD1 123 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 SLC25A39Q9BZJ4 359 aaPredicted RBP8.64□□□□□ -1.03
CTSA-209ENST00000493522 ARV1Q9H2C2 271 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 SLC25A32Q9H2D1 315 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 SRD5A3Q9H8P0 318 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
CTSA-209ENST00000493522 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
CTSA-209ENST00000493522 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
CTSA-209ENST00000493522 SMLR1H3BR10 107 aa8.63□□□□□ -1.03
CTSA-209ENST00000493522 B2MP61769 119 aa8.63□□□□□ -1.03
CTSA-209ENST00000493522 PRR20EP86478 221 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms