RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 H3BNG1 76 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 M0R2Z0 102 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 AZU1P20160 251 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 CNN1P51911 297 aaKnown RBP9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 ERVFC1-1P60608 527 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 SPINK13Q1W4C9 94 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 OR8I2Q8N0Y5 310 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 TMEM256Q8N2U0 113 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 CCDC71LQ8N9Z2 235 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 OR10J6PQ8NGY7 276 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 C16orf92Q96LL3 132 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 CACFD1Q9UGQ2 172 aa9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 TIMM8BQ9Y5J9 83 aaPredicted RBP9.82□□□□□ -0.84
PRPF40A-211ENST00000493468 M6PRP20645 277 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 KLF9Q13886 244 aaPredicted RBP9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 ESRGQ1W209 222 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 SP6Q3SY56 376 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 BAP18Q8IXM2 172 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 ARRDC1Q8N5I2 433 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 C17orf77Q96MU5 243 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 UHRF2Q96PU4 802 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 VCX3BQ9H321 246 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 COPZ2Q9P299 210 aa9.81□□□□□ -0.84
PRPF40A-211ENST00000493468 HMCN2Q8NDA2 5059 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 IGKV1D-37A0A075B6S9 117 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 CEBPZOSA8MTT3 80 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 J3QL48 77 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 CDS2O95674 445 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 FABP1P07148 127 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 GALR1P47211 349 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 TAS2R60P59551 318 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 LYZP61626 148 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 ICAM4Q14773 271 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 IZUMO2Q6UXV1 221 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 TMEM222Q9H0R3 208 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
PRPF40A-211ENST00000493468 ZFP92A6NM28 416 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 FAM229AH3BQW9 127 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 KRTAP10-1P60331 282 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 ZNF90Q03938 601 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 Q6ZSN1 163 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 ZFAND1Q8TCF1 268 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 RNASE8Q8TDE3 154 aaKnown RBP9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 RBPMSQ93062 196 aaKnown RBP9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 PPP1R14BQ96C90 147 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 U3KQ87 197 aa9.79□□□□□ -0.84
PRPF40A-211ENST00000493468 SNRPGP15A8MWD9 76 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 ZNF701M0R085 212 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 ADAP1O75689 374 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 IFNA5P01569 189 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 OR5I1Q13606 314 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 RNASE12Q5GAN4 147 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 RNASE10Q5GAN6 216 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 TMEM144Q7Z5S9 345 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 TMEM263Q8WUH6 116 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 LINC01587Q99440 93 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 MDFICQ9P1T7 246 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 RAB26Q9ULW5 256 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 SLC45A2Q9UMX9 530 aa9.78□□□□□ -0.84
PRPF40A-211ENST00000493468 TRAV12-2A0A075B6T6 113 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 TBPP20226 339 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 FUSP35637 526 aaKnown RBP eCLIP9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 ATP5IP56385 69 aaPredicted RBP9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 GAMTQ14353 236 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 SNX29P2Q8IUI4 249 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 OR4D5Q8NGN0 318 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 LHFPL5Q8TAF8 219 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 GLYATL2Q8WU03 294 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 SLC35E1Q96K37 410 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 SLC25A32Q9H2D1 315 aa9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
PRPF40A-211ENST00000493468 SMIM31A0A1B0GVY4 71 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 GABARAPH6UMI1 98 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 GABARAPO95166 117 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 CFDP00746 253 aaPredicted RBP9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 APOA1P02647 267 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 OR5AC1P0C628 307 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 ZNF182P17025 639 aaPredicted RBP9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 RPS19P39019 145 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 OR1B1Q8NGR6 318 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 OR13C8Q8NGS7 320 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 GPR82Q96P67 336 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 TRGV9Q99603 122 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 RSG1Q9BU20 258 aa9.76□□□□□ -0.85
PRPF40A-211ENST00000493468 TRAV8-2A0A0B4J237 113 aa9.75□□□□□ -0.85
PRPF40A-211ENST00000493468 A0A0J9YY99 117 aa9.75□□□□□ -0.85
PRPF40A-211ENST00000493468 SIVA1O15304 175 aa9.75□□□□□ -0.85
PRPF40A-211ENST00000493468 HOXA5P20719 270 aa9.75□□□□□ -0.85
PRPF40A-211ENST00000493468 NFE4Q86UQ8 179 aa9.75□□□□□ -0.85
PRPF40A-211ENST00000493468 LGI3Q8N145 548 aa9.75□□□□□ -0.85
PRPF40A-211ENST00000493468 TERB2Q8NHR7 220 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms