RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 ZNF709Q8N972 641 aa13.25□□□□□ -0.29
CHD1L-209ENST00000492728 LINC00052Q96N35 136 aa13.25□□□□□ -0.29
CHD1L-209ENST00000492728 SRRQ9GZT4 340 aa13.25□□□□□ -0.29
CHD1L-209ENST00000492728 SAV1Q9H4B6 383 aaPredicted RBP13.25□□□□□ -0.29
CHD1L-209ENST00000492728 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 CCDC160A6NGH7 325 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 WRBO00258 174 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 SYNGR2O43760 224 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
CHD1L-209ENST00000492728 TCTAP57738 103 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 C20orf173Q96LM9 149 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 TMED3Q9Y3Q3 217 aa13.24□□□□□ -0.29
CHD1L-209ENST00000492728 ZNF705FA8MVS1 300 aaPredicted RBP13.23□□□□□ -0.29
CHD1L-209ENST00000492728 SNRPGP15A8MWD9 76 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 ADAP1O75689 374 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
CHD1L-209ENST00000492728 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
CHD1L-209ENST00000492728 PSMB3P49720 205 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 RAB11AP62491 216 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 C1orf194Q5T5A4 169 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 C1QTNF4Q9BXJ3 329 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 SLC25A32Q9H2D1 315 aa13.23□□□□□ -0.29
CHD1L-209ENST00000492728 S100A5P33763 92 aa13.22□□□□□ -0.29
CHD1L-209ENST00000492728 NUTF2P61970 127 aaKnown RBP13.22□□□□□ -0.29
CHD1L-209ENST00000492728 BAK1Q16611 211 aa13.22□□□□□ -0.29
CHD1L-209ENST00000492728 DEDD2Q8WXF8 326 aa13.22□□□□□ -0.29
CHD1L-209ENST00000492728 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
CHD1L-209ENST00000492728 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
CHD1L-209ENST00000492728 DNAH17Q9UFH2 4485 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 PIGBOS1A0A0B4J2F0 54 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 MED6O75586 246 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 FABP1P07148 127 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 SPANXN5Q5MJ07 72 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 ACOT7LQ6ZUV0 252 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 OR8I2Q8N0Y5 310 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 COQ8AQ8NI60 647 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 CIB3Q96Q77 187 aaPredicted RBP13.21□□□□□ -0.29
CHD1L-209ENST00000492728 NEU1Q99519 415 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 SDHCQ99643 169 aaPredicted RBP13.21□□□□□ -0.29
CHD1L-209ENST00000492728 PFDN2Q9UHV9 154 aa13.21□□□□□ -0.29
CHD1L-209ENST00000492728 DEFB131BA0A096LNP1 70 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 C9orf170A2RU37 121 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 AMBPP02760 352 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 BTCP35070 178 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 ID1P41134 155 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 PAX9P55771 341 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 OR4B1Q8NGF8 309 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 SLC25A22Q9H936 323 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 KIAA1109Q2LD37 5005 aa13.2□□□□□ -0.3
CHD1L-209ENST00000492728 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 A0A0J9YX75 114 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 ZNF98A6NK75 572 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 ISLRO14498 428 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 CCNKO75909 580 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 NDUFB6O95139 128 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 POLR2GP62487 172 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD1L-209ENST00000492728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 OR4D5Q8NGN0 318 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 CLUHP3Q96NS8 147 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
CHD1L-209ENST00000492728 PMS2P5A8MQ11 134 aa13.18□□□□□ -0.3
CHD1L-209ENST00000492728 ORM2P19652 201 aa13.18□□□□□ -0.3
CHD1L-209ENST00000492728 EMP1P54849 157 aa13.18□□□□□ -0.3
CHD1L-209ENST00000492728 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
CHD1L-209ENST00000492728 ID3Q02535 119 aa13.18□□□□□ -0.3
CHD1L-209ENST00000492728 AMTNQ6UX39 209 aa13.18□□□□□ -0.3
CHD1L-209ENST00000492728 TRAV8-2A0A0B4J237 113 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 A8MTW9 85 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 PLA2G2EQ9NZK7 142 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 DOK5Q9P104 306 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
CHD1L-209ENST00000492728 STRAPQ9Y3F4 350 aaKnown RBP13.17□□□□□ -0.3
CHD1L-209ENST00000492728 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
CHD1L-209ENST00000492728 H3BRN7 92 aa13.16□□□□□ -0.3
CHD1L-209ENST00000492728 ANXA7P20073 488 aaKnown RBP13.16□□□□□ -0.3
CHD1L-209ENST00000492728 RPP30P78346 268 aaKnown RBP13.16□□□□□ -0.3
CHD1L-209ENST00000492728 PSG9Q00887 426 aa13.16□□□□□ -0.3
CHD1L-209ENST00000492728 TMEM144Q7Z5S9 345 aa13.16□□□□□ -0.3
CHD1L-209ENST00000492728 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
CHD1L-209ENST00000492728 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
CHD1L-209ENST00000492728 ZNF701M0R085 212 aaPredicted RBP13.15□□□□□ -0.3
CHD1L-209ENST00000492728 SSSCA1O60232 199 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 CFDP00746 253 aaPredicted RBP13.15□□□□□ -0.3
CHD1L-209ENST00000492728 OR4E1P0C645 316 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 GALR1P47211 349 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 PSENENQ9NZ42 101 aa13.15□□□□□ -0.3
CHD1L-209ENST00000492728 DKK2Q9UBU2 259 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms