RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SMCO3A2RU48 225 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 SOCS3O14543 225 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 JTBO76095 146 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 METTL15P1P0C7V9 234 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
MDC1-207ENST00000492462 RRAS2P62070 204 aaPredicted RBP8.56□□□□□ -1.04
MDC1-207ENST00000492462 CNPY1Q3B7I2 92 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
MDC1-207ENST00000492462 CEMP1Q6PRD7 247 aaPredicted RBP8.56□□□□□ -1.04
MDC1-207ENST00000492462 TMEM14EPQ6UXP3 125 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 CSNK1G2-AS1Q8NCQ2 148 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 PPP1R14BQ96C90 147 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 SLC25A32Q9H2D1 315 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 NUDT15Q9NV35 164 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 DOK5Q9P104 306 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 X6R8D5 127 aa8.56□□□□□ -1.04
MDC1-207ENST00000492462 VPS13DQ5THJ4 4388 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 H3BMM0 161 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 MBPP02686 304 aaPredicted RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 RBMY1A1P0DJD3 496 aaKnown RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 SPP1P10451 314 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 ORM2P19652 201 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 SNRPD3P62318 126 aaKnown RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 ARL16Q0P5N6 197 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 RBMY1FQ15415 496 aaKnown RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 C1orf194Q5T5A4 169 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 TMEM144Q7Z5S9 345 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 OR8I2Q8N0Y5 310 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 TMEM217Q8N7C4 229 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 Q8NAQ8 132 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 PHLDA1Q8WV24 401 aaPredicted RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 CCDC32Q9BV29 185 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 C11orf68Q9H3H3 251 aaKnown RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 SLC25A22Q9H936 323 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 SEPSECSQ9HD40 501 aaKnown RBP8.55□□□□□ -1.04
MDC1-207ENST00000492462 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
MDC1-207ENST00000492462 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 C7orf66A4D0T2 115 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 A6NHS1 94 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 ZNF98A6NK75 572 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 F6UB75 175 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 IGKV3-20P01619 116 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 NUP62P37198 522 aaPredicted RBP8.54□□□□□ -1.04
MDC1-207ENST00000492462 FXYD7P58549 80 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 CYP2G1PQ6ZSU1 146 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 BPIFCQ8NFQ6 507 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 OR1B1Q8NGR6 318 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 ZNF431Q8TF32 576 aaPredicted RBP8.54□□□□□ -1.04
MDC1-207ENST00000492462 LINC00476Q8WZB0 136 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 SCRT1Q9BWW7 348 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 XCL2Q9UBD3 114 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 FBXL17Q9UF56 701 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 PFDN2Q9UHV9 154 aa8.54□□□□□ -1.04
MDC1-207ENST00000492462 ABCA13Q86UQ4 5058 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
MDC1-207ENST00000492462 ZNF705EA8MWA4 302 aaPredicted RBP8.53□□□□□ -1.04
MDC1-207ENST00000492462 FAM25EA8MYX2 175 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 CFDP00746 253 aaPredicted RBP8.53□□□□□ -1.04
MDC1-207ENST00000492462 IL5P05113 134 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 HLA-DRB4P13762 266 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 PSMB3P49720 205 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 DLK1P80370 383 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 IGFL4Q6B9Z1 124 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 RSG1Q9BU20 258 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 LSM5Q9Y4Y9 91 aaKnown RBP8.53□□□□□ -1.04
MDC1-207ENST00000492462 HLA-DRB4X5D2U9 266 aa8.53□□□□□ -1.04
MDC1-207ENST00000492462 FAM240BA0A1B0GVZ2 78 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 H3BRN7 92 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 K7EPK0 472 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 TSC22D2O75157 780 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 LINC00869P0C866 280 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 ID1P41134 155 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 TAS2R30P59541 319 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 IFITM3Q01628 133 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 SLC38A11Q08AI6 406 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 TMEM41BQ5BJD5 291 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 PATE2Q6UY27 113 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 LINC00299Q6ZSB3 139 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 C12orf45Q8N5I9 185 aaPredicted RBP8.52□□□□□ -1.05
MDC1-207ENST00000492462 UHRF2Q96PU4 802 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 TMEM147Q9BVK8 224 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 SAV1Q9H4B6 383 aaPredicted RBP8.52□□□□□ -1.05
MDC1-207ENST00000492462 C11orf1Q9H5F2 150 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
MDC1-207ENST00000492462 TRAV8-2A0A0B4J237 113 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 C5orf51A6NDU8 294 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 ISLRO14498 428 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 LY6G6CO95867 125 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 GALR1P47211 349 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 ASAH1Q13510 395 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 ZNF846Q147U1 533 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 FOXI2Q6ZQN5 318 aa8.51□□□□□ -1.05
MDC1-207ENST00000492462 OR10P1Q8NGE3 313 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms